Homologs in group_3120

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19845 FBDBKF_19845 56.2 Morganella morganii S1 - TIGR03759 family integrating conjugative element protein
EHELCC_10570 EHELCC_10570 56.2 Morganella morganii S2 - TIGR03759 family integrating conjugative element protein
NLDBIP_10915 NLDBIP_10915 56.2 Morganella morganii S4 - TIGR03759 family integrating conjugative element protein
LHKJJB_10440 LHKJJB_10440 56.2 Morganella morganii S3 - TIGR03759 family integrating conjugative element protein
HKOGLL_16605 HKOGLL_16605 56.2 Morganella morganii S5 - TIGR03759 family integrating conjugative element protein

Distribution of the homologs in the orthogroup group_3120

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3120

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01515
Feature type CDS
Gene -
Product TIGR03759 family integrating conjugative element protein
Location 372735 - 373439 (strand: 1)
Length 705 (nucleotides) / 234 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_3120
Orthogroup size 6
N. genomes 6

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Genomic region

Protein Sequence

MKIQSILNSQFLVSLGISVLTLSTEGMADQSQHQVLKTEQQALEQSLIAENAQEWKLTEKEWQRYEMLKKGKRGLFSPNLDPLTLLGIEARTYEERRYFAELVVRQEFQRVEAELAFQREANQAWLRLYPEILPIQNEMRESRQALFVKESCSICEVKLAQLIKLNQPIDIYLVGSGGKDDVIRNWAKKHHIPIEKVKNRHITLNHDNGIWLKHGNGIMPVVLQQGTQGWQRVD

Flanking regions ( +/- flanking 50bp)

CCGACAGAAATACTCACAAACTCAACATTATCAGCGGATAGGATGTTGCAATGAAAATTCAATCTATATTGAATTCTCAATTTTTAGTCTCATTGGGGATTAGCGTGTTGACATTGTCAACAGAAGGAATGGCGGATCAAAGTCAACATCAAGTTTTAAAAACAGAGCAACAGGCATTAGAACAATCACTAATCGCTGAAAATGCTCAAGAATGGAAATTAACAGAGAAAGAATGGCAACGTTATGAAATGCTAAAAAAGGGGAAACGAGGGCTGTTTTCACCGAATTTAGATCCCTTAACTTTATTAGGTATTGAAGCTCGTACTTATGAGGAGCGACGTTATTTTGCTGAATTAGTGGTGAGGCAAGAATTTCAGCGTGTTGAAGCAGAATTAGCCTTTCAGCGAGAGGCGAATCAAGCATGGCTTCGTCTTTATCCTGAAATTTTACCAATTCAAAATGAAATGAGAGAAAGTCGTCAGGCTTTATTTGTAAAAGAAAGTTGTTCTATTTGTGAGGTAAAACTCGCTCAGCTTATCAAACTAAATCAACCTATTGATATCTATTTAGTGGGAAGTGGGGGGAAAGATGATGTGATACGAAATTGGGCTAAAAAACATCATATTCCTATCGAAAAGGTAAAAAATCGCCATATCACATTAAACCATGATAACGGGATATGGCTAAAGCATGGCAATGGAATAATGCCTGTTGTTTTACAACAAGGAACGCAAGGATGGCAAAGAGTCGATTAGTTTTTTTATTTATCTCCATTGTTTATCTTGGTGATAATAGTCGCCGTTGT