Homologs in group_813

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04055 FBDBKF_04055 41.8 Morganella morganii S1 - Conjugal transfer protein
EHELCC_06480 EHELCC_06480 41.8 Morganella morganii S2 - Conjugal transfer protein
NLDBIP_06805 NLDBIP_06805 41.8 Morganella morganii S4 - Conjugal transfer protein
LHKJJB_06340 LHKJJB_06340 41.8 Morganella morganii S3 - Conjugal transfer protein
HKOGLL_04590 HKOGLL_04590 41.8 Morganella morganii S5 - Conjugal transfer protein
PMI_RS12810 PMI_RS12810 42.3 Proteus mirabilis HI4320 - PilL N-terminal domain-containing protein

Distribution of the homologs in the orthogroup group_813

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_813

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01510
Feature type CDS
Gene -
Product PilL N-terminal domain-containing protein
Location 372184 - 372738 (strand: 1)
Length 555 (nucleotides) / 184 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_813
Orthogroup size 7
N. genomes 6

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Genomic region

Protein Sequence

MNKPISFIICFTTLFITACTPKEKLQQLETEPRSIILNKNIQIAQPDLYLTTPKVVRYDRYLLINTSPTLAQSDPIEQIIDVHIPTSQQSSVSDAMRYILQPSGYSLCKTTSSNQVLYNQKLPVVHHQLGPMRLKQALQVLAGVAWQLEIDAVQRIICHSLREGYQLPTEILTNSTLSADRMLQ

Flanking regions ( +/- flanking 50bp)

CCTTAACCAACAATCCATCAAAGTTGGACTCTTTGTAACAGAGAGTCCTTATGAACAAACCTATTTCCTTTATAATCTGTTTCACTACCTTATTTATAACGGCTTGTACTCCGAAAGAAAAACTTCAGCAACTTGAAACTGAACCTCGCTCGATCATTCTCAATAAAAACATTCAAATAGCACAGCCCGATCTCTATCTAACAACACCAAAAGTTGTGCGTTATGATCGCTATCTATTGATAAATACATCTCCAACGTTGGCTCAAAGTGACCCGATCGAACAAATAATTGATGTTCATATCCCAACTTCTCAACAATCCTCTGTTAGTGATGCAATGCGTTATATTTTACAACCGTCGGGATATTCTTTATGTAAGACAACGTCGTCTAATCAAGTACTCTATAACCAAAAACTTCCTGTTGTACATCATCAATTAGGGCCTATGCGCTTAAAGCAGGCTTTGCAAGTATTGGCAGGTGTTGCATGGCAACTTGAGATTGATGCAGTACAACGAATAATTTGTCATTCATTGCGAGAAGGTTACCAATTACCGACAGAAATACTCACAAACTCAACATTATCAGCGGATAGGATGTTGCAATGAAAATTCAATCTATATTGAATTCTCAATTTTTAGTCTCATTGGGGATTAGC