Homologs in group_1904

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13950 FBDBKF_13950 46.6 Morganella morganii S1 ubiE Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG
EHELCC_11620 EHELCC_11620 46.6 Morganella morganii S2 ubiE Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG
NLDBIP_11965 NLDBIP_11965 46.6 Morganella morganii S4 ubiE Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG
LHKJJB_11825 LHKJJB_11825 46.6 Morganella morganii S3 ubiE Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG
HKOGLL_10435 HKOGLL_10435 46.6 Morganella morganii S5 ubiE Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG
F4V73_RS12805 F4V73_RS12805 47.0 Morganella psychrotolerans - methyltransferase domain-containing protein

Distribution of the homologs in the orthogroup group_1904

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1904

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75672 6.67e-77 234 48 3 238 4 yafS Uncharacterized protein YafS Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS01090
Feature type CDS
Gene -
Product methyltransferase domain-containing protein
Location 269963 - 270676 (strand: 1)
Length 714 (nucleotides) / 237 (amino acids)
In genomic island -

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_1904
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF08241 Methyltransferase domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2226 Coenzyme transport and metabolism (H) H Ubiquinone/menaquinone biosynthesis C-methylase UbiE/MenG

Protein Sequence

MKAARSGKPICMPSSWRNIPWGEYYRMAIELRLQNWWPKIYGFHMLKLGQLSAELDTKSSMVSHQVNVTTTTTNTDVMASLNYLPFENKSVDVCLMAHVLDYSADPHWLLREADRVLVDDGWIILSSFNPISLLGIGKCTPILRHKQPYYCRMFSLRRQVDWLSVLNYEVITQQNFQIMPFSRPVKRDGKRYHVGGCLNLILARKRTLPLTPTAMKFALPRMSVKGRVLGATRNRPD

Flanking regions ( +/- flanking 50bp)

TGATAAGCTCCATAAAGTTACCTTACTTATAAATATAAAAGGGTTAAACGATGAAAGCAGCGCGTTCGGGAAAACCAATTTGTATGCCAAGCTCTTGGCGTAATATTCCTTGGGGAGAATATTACCGCATGGCAATTGAATTGCGATTACAAAATTGGTGGCCGAAAATATACGGTTTTCATATGCTTAAATTAGGTCAACTTAGTGCTGAACTCGATACTAAATCCAGTATGGTCTCACATCAAGTTAACGTGACTACAACGACGACAAACACAGATGTTATGGCGTCTCTCAATTATCTGCCATTTGAAAATAAATCGGTTGATGTCTGTCTTATGGCTCATGTTTTAGATTACAGTGCAGACCCTCATTGGTTATTAAGAGAAGCCGATCGTGTATTAGTGGATGACGGTTGGATCATCCTATCAAGTTTTAATCCTATCAGCCTATTAGGTATAGGAAAATGTACGCCTATTTTACGGCATAAACAGCCCTATTATTGTCGGATGTTTTCACTTCGTCGCCAAGTTGATTGGCTAAGTGTGCTTAATTATGAAGTGATAACACAACAGAACTTCCAGATTATGCCATTTTCCCGTCCCGTAAAACGTGATGGTAAGCGCTATCATGTCGGGGGATGTTTAAATTTAATATTAGCACGTAAAAGAACGCTTCCTTTAACACCCACCGCGATGAAGTTTGCATTACCGCGTATGAGTGTAAAAGGCAGAGTTTTAGGCGCTACACGTAATCGACCTGATTAATATCACTATCTGCCGTTATTACTCTCAGGTTTTATCTTGTTGACTTTCTA