Homologs in group_4281

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4281

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4281

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P44012 5.41e-55 181 41 4 218 3 HI_0526 Probable ribonuclease HI_0526 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00225
Feature type CDS
Gene -
Product lipoprotein
Location 70309 - 71085 (strand: 1)
Length 777 (nucleotides) / 258 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4281
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF00445 Ribonuclease T2 family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3719 Translation, ribosomal structure and biogenesis (J) J Ribonuclease I

Protein Sequence

MRFIKLLPAILAVILAGCVTQAPEVKQPLKPQAKLVEGVSCILPDVPTANYDYIATNDRYGQNSKASTDYFKLAINYSPAFCDYKKNNIKRLNNDNEKERAKREFDKFEIQCFSDNKFGWIVHGLWAETCDGKSWDECRDWKDIRKHPRLCKGDLPPLEYSAIKPYLCSSPGIDLLQGEWEKHGVCAFDTPEAFFGQQQALFDALVLPEGRPSNSELIKFLKENNPSLKDKEIQINRDEFYICYSKDFEVIDCPKREY

Flanking regions ( +/- flanking 50bp)

CTCATGTTTTGGCGTGAAAGAGTGCAGTTATTGCTCTTTAAGGGGATTTTATGCGCTTTATAAAGCTATTACCTGCTATTTTAGCTGTTATTTTAGCGGGTTGTGTGACACAAGCACCTGAAGTTAAACAACCATTAAAACCGCAAGCAAAATTAGTTGAAGGCGTATCTTGTATTTTACCTGATGTACCTACTGCCAATTATGACTATATTGCGACAAATGATCGTTATGGTCAAAATAGTAAAGCATCAACAGATTACTTTAAATTAGCCATTAATTACTCACCGGCTTTTTGTGATTATAAAAAAAATAATATTAAGCGTTTAAATAACGATAACGAAAAAGAGCGTGCTAAACGCGAATTCGATAAATTTGAAATCCAGTGTTTCTCAGATAATAAATTTGGCTGGATTGTTCATGGGCTATGGGCTGAAACCTGCGATGGTAAATCATGGGATGAATGCCGTGACTGGAAAGACATACGCAAGCATCCTCGTTTATGTAAAGGGGATTTACCACCATTAGAATACTCAGCGATTAAACCTTACTTATGTTCATCACCGGGTATCGACTTATTGCAAGGTGAATGGGAAAAACATGGCGTTTGTGCCTTTGATACGCCAGAAGCATTCTTTGGTCAGCAACAAGCGTTATTTGACGCATTAGTGTTACCAGAAGGCCGCCCTTCAAATAGTGAATTGATTAAGTTCTTAAAAGAAAATAATCCATCATTGAAGGATAAAGAAATTCAAATTAATCGAGATGAATTCTATATTTGTTATAGCAAAGATTTCGAAGTGATTGATTGTCCGAAACGTGAATATTGATCTAGGGATAAAACTTAAATGAACCATAAATATAAACTCGTAGCCCTTGC