Homologs in group_4280

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4280

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4280

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AAN0 1.07e-31 108 60 1 80 3 hybG Hydrogenase maturation factor HybG Shigella flexneri
P0AAM7 1.07e-31 108 60 1 80 1 hybG Hydrogenase maturation factor HybG Escherichia coli (strain K12)
P0AAM8 1.07e-31 108 60 1 80 3 hybG Hydrogenase maturation factor HybG Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AAM9 1.07e-31 108 60 1 80 3 hybG Hydrogenase maturation factor HybG Escherichia coli O157:H7
P20927 5.53e-29 102 61 0 72 3 None Frd operon uncharacterized protein C Proteus vulgaris
P40428 2.18e-23 88 57 0 73 3 hypC Hydrogenase maturation factor HypC Rhodobacter capsulatus
P0AAM6 2e-16 70 45 3 80 3 hypC Hydrogenase maturation factor HypC Shigella flexneri
P0AAM3 2e-16 70 45 3 80 1 hypC Hydrogenase maturation factor HypC Escherichia coli (strain K12)
P0AAM4 2e-16 70 45 3 80 3 hypC Hydrogenase maturation factor HypC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AAM5 2e-16 70 45 3 80 3 hypC Hydrogenase maturation factor HypC Escherichia coli O157:H7
Q7VJB9 1.2e-10 55 32 2 87 3 hypC Hydrogenase maturation factor HypC Helicobacter hepaticus (strain ATCC 51449 / 3B1)
Q57653 2.62e-09 52 32 2 77 3 MJ0200 Uncharacterized hydrogenase expression/formation protein MJ0200 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P31881 1.83e-08 50 40 3 69 3 hypC Hydrogenase maturation factor HypC Azotobacter vinelandii
Q43951 6.04e-08 48 39 3 69 3 hypC Hydrogenase maturation factor HypC Azotobacter chroococcum mcd 1
P31900 1.01e-07 48 31 2 69 3 hypC Hydrogenase maturation factor HypC Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P74095 2.93e-06 44 31 2 72 3 hypC Hydrogenase maturation factor HypC Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P28157 0.000324 38 33 3 69 3 hypC Hydrogenase maturation factor HypC Rhizobium leguminosarum bv. viciae

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS00185
Feature type CDS
Gene hybG
Product hydrogenase maturation factor HybG
Location 60606 - 60872 (strand: 1)
Length 267 (nucleotides) / 88 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_4280
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF01455 HupF/HypC family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0298 Posttranslational modification, protein turnover, chaperones (O) O Hydrogenase maturation factor HybG, HypC/HupF family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K04653 hydrogenase expression/formation protein HypC - -

Protein Sequence

MCLGVPAKIVEVGDDVHQLAYAEVSGVKRAVNISMVCEGDPSELLDKWVLIHVGFAMSILDEQEAQDTLDALQHVYGVTLEEADDAIR

Flanking regions ( +/- flanking 50bp)

ACAACTGGCGAAGGTATGGAAGAGTGGTTAGCTTGGTTGGAGAGCCGTTTATGTGCTTAGGTGTTCCTGCCAAGATAGTTGAGGTGGGCGATGACGTCCACCAACTCGCTTATGCTGAAGTCAGTGGCGTAAAACGTGCCGTCAATATCTCTATGGTTTGTGAGGGTGACCCGTCAGAGTTATTAGATAAGTGGGTGCTTATTCATGTTGGATTTGCCATGAGTATTCTTGATGAACAAGAAGCTCAAGATACTCTGGATGCATTACAACATGTATATGGTGTTACCCTTGAAGAGGCTGATGATGCAATACGTTGATGAATTTCGTGATCCCGAATTGGCCAAAGCATTATTAGCTCAAATACGTG