Homologs in group_3611

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_20115 FBDBKF_20115 100.0 Morganella morganii S1 - Integrase
EHELCC_19350 EHELCC_19350 100.0 Morganella morganii S2 - Integrase
LHKJJB_19470 LHKJJB_19470 100.0 Morganella morganii S3 - Integrase
HKOGLL_19360 HKOGLL_19360 100.0 Morganella morganii S5 - Integrase

Distribution of the homologs in the orthogroup group_3611

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3611

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75969 1.65e-59 190 70 0 126 3 intE Prophage integrase IntE Escherichia coli (strain K12)
P27077 4.31e-54 176 66 0 124 3 int Integrase Enterobacteria phage P21
P16407 1.04e-20 88 38 3 126 3 int Integrase Escherichia phage HK022
P27078 2.81e-19 84 34 4 126 3 int Integrase Enterobacteria phage 434
P03700 3.14e-19 84 34 4 126 1 int Integrase Escherichia phage lambda

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_19480
Feature type CDS
Gene -
Product Integrase
Location 2615 - 3010 (strand: 1)
Length 396 (nucleotides) / 131 (amino acids)
In genomic island -

Contig

Accession ZDB_549
Length 12696 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3611
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF00589 Phage integrase family

Protein Sequence

MLAVVTGTRLAIPLSLRCQALNVSLRDVIAGCRDLYVSKYLVHYTRNTSQSQPGGQVTANTLTTNFKKARDKADIDWGEGTPATFHEMRSLSERLYREQGINTKNLLGHKNWQQTDKYHDDRGKDWIKVLL

Flanking regions ( +/- flanking 50bp)

AAAATTTACGATATCCCTTGTAGGACCATAAATATCCCGGGAATACCGTATTGCTGGCTGTTGTTACCGGAACACGGCTTGCTATCCCCCTCTCCCTCAGATGTCAGGCACTCAATGTCAGCCTGCGGGATGTGATTGCCGGATGCCGTGATCTGTATGTCAGCAAATATTTAGTTCACTACACACGAAACACATCACAGTCACAGCCCGGCGGCCAGGTAACCGCAAATACCCTGACCACCAACTTTAAAAAAGCCAGGGATAAAGCAGATATCGACTGGGGAGAAGGCACTCCGGCAACATTTCACGAAATGCGGTCATTGTCAGAGCGTTTATACCGGGAACAGGGAATTAATACCAAAAACCTGTTGGGCCATAAAAACTGGCAGCAAACCGATAAATATCATGATGATCGTGGCAAAGATTGGATAAAGGTGTTGCTCTGATATTTTATTAGCCCATAGTTGAATTCGTATATCTGCTCCCTTTGATATAT