Homologs in group_3370

Help

4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11540 FBDBKF_11540 100.0 Morganella morganii S1 - Lipoprotein
EHELCC_17460 EHELCC_17460 100.0 Morganella morganii S2 - Lipoprotein
LHKJJB_17900 LHKJJB_17900 100.0 Morganella morganii S3 - Lipoprotein
HKOGLL_18750 HKOGLL_18750 100.0 Morganella morganii S5 - Lipoprotein

Distribution of the homologs in the orthogroup group_3370

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3370

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_18670
Feature type CDS
Gene -
Product Lipoprotein
Location 4964 - 5572 (strand: 1)
Length 609 (nucleotides) / 202 (amino acids)

Contig

Accession ZDB_543
Length 24977 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3370
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Protein Sequence

MKKITIISALVAASLLLGACDKTKAADNGQGERYAAPFGLTWGMTEEALVPRLGSQSETDNSEYVCPLTKVTSKTFSGGLNEAGEYEFRFLPQYGQPDFSGLVGIGYFYSTDDEAAYQTLLKELQHNLEAEYGKPSILESKKADEEHFIYKSEENEISLFVMMRNARFYISLDYSYFPKEHQVSLKNNIQKIKETCIKQRGE

Flanking regions ( +/- flanking 50bp)

TCAAATATGGCGGGATAACGTCATCATTAAATCAGCGGATATACTGAACAATGAAAAAAATAACGATAATTTCTGCATTGGTTGCAGCGTCACTATTACTGGGTGCCTGTGATAAAACAAAAGCAGCGGATAACGGACAAGGTGAGCGTTATGCAGCTCCTTTCGGTCTGACCTGGGGAATGACGGAAGAGGCGTTGGTACCACGGCTCGGTAGTCAGTCTGAAACGGATAACAGTGAATATGTCTGCCCGCTGACTAAAGTGACGTCTAAAACATTTTCCGGCGGATTAAATGAAGCGGGGGAGTACGAATTCCGCTTCTTACCACAGTACGGACAGCCGGATTTCAGCGGGCTGGTCGGTATTGGTTATTTTTATTCCACAGATGATGAAGCGGCATATCAGACACTGCTGAAAGAATTACAGCACAATCTTGAAGCGGAATATGGGAAACCCTCAATACTGGAAAGCAAAAAAGCAGACGAAGAACATTTTATTTATAAATCCGAAGAAAACGAAATCAGTTTATTTGTCATGATGCGTAACGCCCGTTTTTATATTTCACTGGATTACAGTTATTTTCCCAAAGAACATCAGGTCTCCCTGAAAAATAATATACAAAAAATAAAAGAGACCTGCATTAAGCAGCGGGGGGAGTAAGATATCAATAAGTACAGAAAACCACCGCTCATCCGGTGGTTTTCTGTTTG