Homologs in group_3518

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18195 FBDBKF_18195 100.0 Morganella morganii S1 rimI Ribosomal protein S18 acetylase RimI and related acetyltransferases
EHELCC_18230 EHELCC_18230 100.0 Morganella morganii S2 rimI Ribosomal protein S18 acetylase RimI and related acetyltransferases
LHKJJB_18350 LHKJJB_18350 100.0 Morganella morganii S3 rimI Ribosomal protein S18 acetylase RimI and related acetyltransferases
HKOGLL_18085 HKOGLL_18085 100.0 Morganella morganii S5 rimI Ribosomal protein S18 acetylase RimI and related acetyltransferases

Distribution of the homologs in the orthogroup group_3518

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3518

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O31601 0.000176 43 22 2 102 2 yjbC Putative acetyltransferase YjbC Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_18155
Feature type CDS
Gene rimI
Product Ribosomal protein S18 acetylase RimI and related acetyltransferases
Location 4874 - 5407 (strand: 1)
Length 534 (nucleotides) / 177 (amino acids)

Contig

Accession ZDB_540
Length 35191 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3518
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF00583 Acetyltransferase (GNAT) family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3153 General function prediction only (R) R Predicted N-acetyltransferase YhbS

Protein Sequence

MLQLLPVTSPADPVLDDIRPLYESAFPLHEQRTRAGREKLFSQPGYYLYQIRDNDRFAGFTGCWQMGSLFYIEHIAIAPQMRGSGVGQRALSLFCQEKQRVVLEIDPLTDEVAQRRLRFYQHCGFAVNDYIHHHPAYRPEFPPHELVILSYPQVINPEEYQQFKHFLIHHIMPENLL

Flanking regions ( +/- flanking 50bp)

TTACTGATAATGTGAGGTAATTCTCATTTTTCAGGTTGGAAACCTTTTTTATGCTGCAATTACTTCCGGTTACCTCACCGGCTGATCCGGTACTTGATGATATTCGTCCGCTGTATGAATCCGCTTTTCCGCTGCATGAACAGCGCACGCGGGCAGGGCGGGAAAAACTGTTTTCTCAGCCGGGCTATTATCTGTATCAGATAAGGGATAATGACCGCTTTGCCGGATTTACCGGCTGCTGGCAGATGGGTTCCCTGTTTTATATTGAGCACATTGCTATTGCGCCGCAGATGCGCGGCAGCGGAGTCGGGCAACGGGCGTTGTCACTGTTTTGTCAGGAGAAACAACGGGTTGTTCTGGAGATTGATCCGCTGACGGATGAGGTGGCGCAACGCCGTCTGCGTTTTTATCAGCACTGTGGTTTTGCTGTTAATGACTATATTCATCATCACCCGGCTTACCGCCCGGAATTTCCGCCGCATGAGCTGGTGATCCTGAGTTATCCGCAGGTTATTAATCCGGAAGAATATCAGCAATTTAAGCACTTTCTTATCCATCACATTATGCCGGAAAATCTGTTGTAGCGCCCGGCTCACCGCATGTTATGATGACCGCTTTTCCGGCGGTCTGCCTG