Homologs in group_2978

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5 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16660 FBDBKF_16660 84.1 Morganella morganii S1 - Toxin
FBDBKF_18015 FBDBKF_18015 100.0 Morganella morganii S1 cbtA TA system toxin CbtA family protein
EHELCC_16715 EHELCC_16715 100.0 Morganella morganii S2 cbtA TA system toxin CbtA family protein
LHKJJB_17655 LHKJJB_17655 100.0 Morganella morganii S3 cbtA TA system toxin CbtA family protein
HKOGLL_17470 HKOGLL_17470 100.0 Morganella morganii S5 cbtA TA system toxin CbtA family protein

Distribution of the homologs in the orthogroup group_2978

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2978

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P64524 3.85e-25 93 59 0 76 1 cbtA Cytoskeleton-binding toxin CbtA Escherichia coli (strain K12)
P64525 3.85e-25 93 59 0 76 3 cbtA Toxin CbtA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P77692 4.16e-22 85 59 0 66 1 ykfI Toxin YkfI Escherichia coli (strain K12)
Q46953 2.37e-21 83 59 0 66 1 ypjF Toxin YpjF Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_17735
Feature type CDS
Gene cbtA
Product TA system toxin CbtA family protein
Location 53218 - 53466 (strand: -1)
Length 249 (nucleotides) / 82 (amino acids)

Contig

Accession ZDB_537
Length 55765 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2978
Orthogroup size 6
N. genomes 5

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Genomic region

Domains

PF06755 CbtA_toxin of type IV toxin-antitoxin system

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K18837 cytoskeleton-binding toxin CbtA and related proteins - -

Protein Sequence

MKKATLSASPAAVWQTLLTYLLQQHYGLTLNDTEFCDERVIEACLCRGISLCEALNAFAEKYALVRTDRCNSSYTTRRHCNV

Flanking regions ( +/- flanking 50bp)

GAGGAGTGTGCTGCCATTTTCCGTCTTATCGATTAACCGGGAGCAACACCATGAAAAAGGCAACATTATCTGCGTCACCGGCGGCAGTCTGGCAGACACTGCTGACTTACCTGCTGCAACAACACTACGGCCTCACTCTGAATGACACGGAGTTTTGTGATGAACGTGTCATTGAGGCCTGCCTCTGCCGGGGTATATCGTTGTGTGAGGCACTGAATGCCTTTGCGGAGAAATACGCTCTGGTCCGCACTGACCGGTGCAACAGCAGCTATACCACCCGCAGACACTGCAACGTATAAAAAGCCCATACCCGTACCTCATCTTATCTCTTCCTTTATCCCGTTCAGCC