Homologs in group_3452

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15565 FBDBKF_15565 100.0 Morganella morganii S1 marC Small neutral amino acid transporter SnatA, MarC family
EHELCC_15925 EHELCC_15925 100.0 Morganella morganii S2 marC Small neutral amino acid transporter SnatA, MarC family
LHKJJB_16360 LHKJJB_16360 100.0 Morganella morganii S3 marC Small neutral amino acid transporter SnatA, MarC family
HKOGLL_16130 HKOGLL_16130 100.0 Morganella morganii S5 marC Small neutral amino acid transporter SnatA, MarC family

Distribution of the homologs in the orthogroup group_3452

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3452

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q58382 6.42e-12 65 29 4 167 3 MJ0972 UPF0056 membrane protein MJ0972 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
O66819 4.24e-08 55 25 6 206 3 aq_540 UPF0056 membrane protein aq_540 Aquifex aeolicus (strain VF5)
O58499 3.84e-07 52 23 6 209 3 PH0760 UPF0056 membrane protein PH0760 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Q8K9Q4 8.64e-07 51 24 2 157 3 BUsg_257 UPF0056 membrane protein BUsg_257 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
O28169 2.6e-06 50 23 3 203 3 AF_2111 UPF0056 membrane protein AF_2111 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q7ADY8 6.1e-06 48 23 5 169 3 marC UPF0056 inner membrane protein MarC Escherichia coli O157:H7
O32244 6.32e-06 48 27 5 172 3 yvbG UPF0056 membrane protein YvbG Bacillus subtilis (strain 168)
A8AGR9 9.84e-06 48 25 4 168 3 marC UPF0056 inner membrane protein MarC Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
B1LF84 1.44e-05 47 23 5 168 3 marC UPF0056 inner membrane protein MarC Escherichia coli (strain SMS-3-5 / SECEC)
Q5PN94 2.48e-05 47 24 5 168 3 marC UPF0056 inner membrane protein MarC Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q9UZ49 2.65e-05 47 24 7 205 3 PYRAB13050 UPF0056 membrane protein PYRAB13050 Pyrococcus abyssi (strain GE5 / Orsay)
P0A2L5 3.85e-05 46 24 5 168 3 marC UPF0056 inner membrane protein MarC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2L6 3.85e-05 46 24 5 168 3 marC UPF0056 inner membrane protein MarC Salmonella typhi
A9MYZ8 3.85e-05 46 24 5 168 3 marC UPF0056 inner membrane protein MarC Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q57PB6 3.85e-05 46 24 5 168 3 marC UPF0056 inner membrane protein MarC Salmonella choleraesuis (strain SC-B67)
Q59071 5.01e-05 46 32 5 148 3 MJ1677 UPF0056 membrane protein MJ1677 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q3Z1R5 5.07e-05 46 23 5 168 3 marC UPF0056 inner membrane protein MarC Shigella sonnei (strain Ss046)
P0AEY2 5.07e-05 46 23 5 168 3 marC UPF0056 inner membrane protein MarC Shigella flexneri
Q0T4K0 5.07e-05 46 23 5 168 3 marC UPF0056 inner membrane protein MarC Shigella flexneri serotype 5b (strain 8401)
Q32G29 5.07e-05 46 23 5 168 3 marC UPF0056 inner membrane protein MarC Shigella dysenteriae serotype 1 (strain Sd197)
Q320K3 5.07e-05 46 23 5 168 3 marC UPF0056 inner membrane protein MarC Shigella boydii serotype 4 (strain Sb227)
P0AEY1 5.07e-05 46 23 5 168 1 marC UPF0056 inner membrane protein MarC Escherichia coli (strain K12)
Q0THR0 5.07e-05 46 23 5 168 3 marC UPF0056 inner membrane protein MarC Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B1XEB6 5.07e-05 46 23 5 168 3 marC UPF0056 inner membrane protein MarC Escherichia coli (strain K12 / DH10B)
A7ZLY5 5.07e-05 46 23 5 168 3 marC UPF0056 inner membrane protein MarC Escherichia coli O139:H28 (strain E24377A / ETEC)
B1IRT1 5.22e-05 46 23 5 168 3 marC UPF0056 inner membrane protein MarC Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A082 5.22e-05 46 23 5 168 3 marC UPF0056 inner membrane protein MarC Escherichia coli O9:H4 (strain HS)
Q1RBN8 6.02e-05 46 23 5 168 3 marC UPF0056 inner membrane protein MarC Escherichia coli (strain UTI89 / UPEC)
Q8FHE5 6.02e-05 46 23 5 168 3 marC UPF0056 inner membrane protein MarC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A1ABA8 6.02e-05 46 23 5 168 3 marC UPF0056 inner membrane protein MarC Escherichia coli O1:K1 / APEC
A9MRQ1 8.71e-05 45 24 5 168 3 marC UPF0056 inner membrane protein MarC Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
P57355 0.000136 45 25 3 181 3 BU267 UPF0056 membrane protein BU267 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_16445
Feature type CDS
Gene marC
Product Small neutral amino acid transporter SnatA, MarC family
Location 38983 - 39636 (strand: -1)
Length 654 (nucleotides) / 217 (amino acids)

Contig

Accession ZDB_533
Length 80662 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3452
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF01914 MarC family integral membrane protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2095 Amino acid transport and metabolism (E) E Small neutral amino acid transporter SnatA, MarC family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05595 multiple antibiotic resistance protein - -

Protein Sequence

MNEWLDNILLNYVTFVSLFSPPATITAATIILGRIDRNILWQIAWKIAAGYTLVMLVVIWLGNWLLTALGLSADALTVTGGIALLAQGWPMLIRGVKEEHSDIPVSVAPPKDIMRLAMVPLLFPLSMGGGTIAVGISLAGHSDSLSGLIQLSVVILLMLPTIALTFLATGPLHGRLSPGVMDTLARISGIILVTLAIQLLVSGMVGLITTNLKHLTG

Flanking regions ( +/- flanking 50bp)

CCTTATTCTCTGTCTGTTTGCCGGTTATCTGCGGAAACGGAGCCGGAAAGATGAATGAATGGCTCGATAATATTCTTCTTAATTATGTGACTTTTGTGTCGCTGTTCAGTCCCCCGGCAACTATCACCGCCGCCACGATTATCCTTGGCCGGATTGACCGGAACATATTGTGGCAAATTGCCTGGAAAATTGCGGCGGGATACACGCTGGTCATGCTGGTGGTTATCTGGCTGGGGAACTGGCTGCTGACGGCTCTCGGGCTGAGTGCGGATGCCCTGACTGTTACCGGCGGTATTGCTTTACTGGCGCAGGGATGGCCGATGCTTATCCGTGGTGTCAAAGAGGAGCACAGCGATATTCCGGTCAGTGTGGCGCCGCCGAAAGATATCATGCGGCTGGCAATGGTACCGCTGCTTTTTCCGCTGTCGATGGGCGGCGGCACGATAGCGGTCGGAATTTCACTGGCCGGACACAGTGATTCCCTGTCCGGACTGATACAGCTTTCTGTTGTGATCCTGCTGATGTTACCTACTATTGCCCTGACTTTTCTGGCAACCGGGCCGCTGCACGGACGTTTATCCCCCGGGGTGATGGACACCCTGGCGCGGATCTCCGGCATTATTCTGGTCACACTGGCGATTCAGTTACTGGTCTCGGGAATGGTCGGTCTTATCACAACGAATCTGAAGCATCTTACGGGGTGATAAAAAATAAAGCCCGGAAAACCGGGCTTTATGGGGTCTCAGAGAGAGGA