Homologs in group_1383

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08545 FBDBKF_08545 100.0 Morganella morganii S1 tamB Autotransporter translocation and assembly protein TamB
EHELCC_12980 EHELCC_12980 100.0 Morganella morganii S2 tamB Autotransporter translocation and assembly protein TamB
LHKJJB_13235 LHKJJB_13235 100.0 Morganella morganii S3 tamB Autotransporter translocation and assembly protein TamB
HKOGLL_11795 HKOGLL_11795 100.0 Morganella morganii S5 tamB Autotransporter translocation and assembly protein TamB
F4V73_RS09770 F4V73_RS09770 90.5 Morganella psychrotolerans - translocation/assembly module TamB domain-containing protein
PMI_RS16880 PMI_RS16880 65.4 Proteus mirabilis HI4320 - translocation/assembly module TamB domain-containing protein

Distribution of the homologs in the orthogroup group_1383

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1383

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
E1WAU5 0.0 1317 52 10 1261 3 tamB Translocation and assembly module subunit TamB Salmonella typhimurium (strain SL1344)
P39321 0.0 1315 52 9 1259 1 tamB Translocation and assembly module subunit TamB Escherichia coli (strain K12)
D2TN57 0.0 1308 51 9 1259 1 tamB Translocation and assembly module subunit TamB Citrobacter rodentium (strain ICC168)
Q57523 0.0 796 36 21 1276 1 tamB Translocation and assembly module subunit TamB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P57189 3.97e-34 146 18 19 882 4 BU087 Uncharacterized protein BU087 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q8KA32 3.46e-20 100 17 23 990 4 BUsg_080 Uncharacterized protein BUsg_080 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_13320
Feature type CDS
Gene tamB
Product Autotransporter translocation and assembly protein TamB
Location 70286 - 74056 (strand: -1)
Length 3771 (nucleotides) / 1256 (amino acids)

Contig

Accession ZDB_528
Length 162442 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1383
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04357 TamB, inner membrane protein subunit of TAM complex

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2911 Intracellular trafficking, secretion, and vesicular transport (U) U Autotransporter translocation and assembly protein TamB

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09800 translocation and assembly module TamB - -

Protein Sequence

MKWLKYLKWPAIILLVLILLIGGTLGWILGTQSGLHFALNLAPRVVSGLAIGQVEGDLRNLTLKQVKYTMPGIDVSVDKVSLALRLSCLKDMTLCVENLSTDGTRVAVDTVKLPPSEETPPSEPLTELNAPLTIFLDSLSVTNTQVTVDDMAVNLDTFRTAMTWQGDQLTLKPTVINALSVVLPKSDPAAAEEPAPAADAPEKPLGETISEIFAQPMLAELPEVILPLNISVEGISGENWQVSGDAPVTLNSLHLALFNKGQVLTLSDLSADAPQGNIAVSGEVALSEKWPVALSVKGHVRDFEEFSGQDLDLTLNGGLLDELKLALALKGPVNATLDAQTNLTQADLPLLLTLESQKVSWPLTGEADYQLDGVKLRLNGKVSGYDLSLRSDIKGKDIPPALLTLDAKGNTEQLNLTRLRLNALQGFAEVTGVADWQKAISWQAVLTLSGLNTAKAYPEWPAKVDGKISTRGSLYGGNWELEIPDITLDGKVKTYPLKARGNVKGNAGGQWTIPDLKLALGNNKLDVRGELADAWKLDADINAPALGGLVPGLAGTVKGKLNVRGNMEKPQILADLAVHSLKWQNDLSVADAKIKGDITSAEQIKGQLDVTVNQLRQADLVISNLTLNAKGTEAQHQLKLTMKGEPVSAQLMLNGGFDRKTETWKGTLNNTRFDTPVGEWSLSKAMALTYLNEKQEVTIGTHCWVNPDARICVPKPITAGASGNASVALERFDLAMIKPFLGPDTRLDGVFSGNVNVRWFADGSQPVVDASLKGNGVKVVQNLDGTNLPVAFDTLTMTAAMKNGKLNLQWLIAIAGNGKINGNVQISDLEKRRQLSGNVGIDNISLDLLKPLLGKGDKATGRLNAGLRLGGNAASPLLFGQLGLSDLAVSGRLLPFDITTGGLTVNFDGARSDLSGNIKTPEGYLNLSGNADWRRMDAWSARIFAQGDKLRVSLPPMIRIDVSPDLVFEATPSMLKLDGTVNIPWARITVHEVPESAVSATSDEVMLDDNLQPIREKQTSIPILSNLRIHIGDDVLLDAFGLKAKLTGDLKVAQDKQGLGLNGQVDIPRGRFHAYGQDLLVRKGQILFSGPADQPFLNLEAIRNPDNTANGVIAGVRVTGLADRPKVEIFSDPAMSQENALSYLLRGEGLDSGDADSSQMTSMLISLGVAQSGQLVGKIGETFGISDLALDTQGVGDKSQVVVSGKITNDLQVKYGVGIFDSLATLTLRYRLMPRLYLEAVSGVNQAIDLLYQFEF

Flanking regions ( +/- flanking 50bp)

AACGAAACGAAAAATATCCAGTTTTACATCGGTTTGGGGGCAGAACTCTGATGAAATGGCTGAAGTATCTGAAATGGCCGGCAATCATTCTGCTGGTCCTCATTCTGCTGATTGGCGGCACACTCGGCTGGATCCTGGGCACACAGTCCGGCCTGCATTTTGCACTGAATCTTGCACCGCGTGTGGTTTCCGGCCTGGCTATCGGTCAGGTTGAGGGTGATCTGCGTAATCTGACCCTGAAGCAGGTGAAATACACCATGCCGGGTATTGATGTCAGCGTGGATAAGGTCAGCCTGGCGCTGCGCCTGAGCTGCCTGAAAGACATGACACTCTGTGTTGAAAACCTCAGTACGGACGGCACGCGTGTTGCTGTCGATACGGTAAAACTGCCGCCGTCAGAAGAAACTCCGCCGTCAGAGCCGCTGACAGAGCTGAATGCGCCGCTGACCATTTTCCTGGATTCTCTCTCTGTGACCAACACACAGGTCACCGTGGATGATATGGCGGTAAATCTGGATACCTTCCGCACCGCCATGACCTGGCAGGGCGACCAGTTGACCCTGAAACCAACGGTAATTAATGCCCTTTCTGTTGTGCTGCCGAAAAGTGACCCGGCTGCGGCAGAAGAACCGGCGCCGGCAGCGGATGCACCGGAAAAGCCGTTAGGTGAAACTATCAGTGAGATTTTTGCTCAGCCGATGCTGGCAGAATTGCCGGAGGTTATTCTGCCGCTGAATATATCAGTGGAAGGTATTTCCGGTGAAAACTGGCAGGTGAGCGGTGATGCACCGGTAACCCTCAATTCCCTGCACCTGGCACTGTTTAACAAAGGACAGGTGCTGACCCTCAGTGATCTGTCTGCGGATGCGCCACAGGGCAATATTGCGGTCAGCGGGGAAGTGGCGCTCAGTGAAAAATGGCCGGTTGCGTTGTCGGTTAAAGGCCATGTCCGTGATTTTGAGGAGTTCAGCGGGCAGGATCTCGATCTCACCCTGAACGGCGGGCTGCTCGATGAGCTGAAACTGGCACTGGCACTGAAAGGGCCGGTCAATGCCACGCTGGATGCACAGACCAACCTGACACAGGCCGATCTGCCGCTGCTGCTGACCCTGGAGAGTCAGAAAGTCAGCTGGCCGCTGACCGGTGAGGCGGATTATCAGCTTGATGGCGTGAAACTGCGCCTTAACGGGAAAGTGAGCGGTTACGACCTCTCCCTGCGTTCGGATATCAAAGGAAAGGACATCCCGCCTGCGCTGCTGACGCTGGATGCGAAAGGGAATACTGAACAGCTGAATCTTACCCGGCTGCGCCTGAATGCGTTACAGGGCTTTGCGGAAGTGACCGGGGTGGCGGACTGGCAGAAAGCCATCAGCTGGCAGGCGGTTCTGACGCTCTCCGGGCTGAATACCGCAAAAGCCTATCCGGAGTGGCCGGCCAAAGTGGACGGCAAAATCAGTACCCGGGGCAGCCTGTACGGCGGTAACTGGGAGCTTGAAATCCCGGATATCACCCTTGACGGCAAAGTGAAAACCTATCCGCTGAAAGCGCGCGGTAATGTGAAAGGTAACGCAGGCGGTCAGTGGACAATCCCGGATCTGAAACTGGCACTGGGTAACAATAAACTGGATGTGCGGGGCGAGCTGGCAGATGCCTGGAAGCTGGATGCGGATATCAATGCACCGGCGCTCGGCGGCCTGGTTCCGGGGCTGGCGGGAACGGTCAAAGGGAAGCTCAATGTCCGTGGCAATATGGAAAAACCACAGATCCTCGCCGACCTGGCTGTTCACAGCCTGAAATGGCAGAACGATCTGTCGGTGGCGGATGCGAAAATCAAAGGGGATATCACCTCCGCAGAGCAGATCAAAGGTCAGCTGGATGTGACGGTGAATCAGCTGAGGCAGGCCGATCTGGTGATCAGCAACCTGACCCTGAATGCCAAAGGTACCGAAGCACAGCACCAGCTGAAACTGACCATGAAAGGCGAGCCGGTCTCGGCACAACTGATGCTGAACGGCGGATTTGACCGTAAAACCGAAACCTGGAAAGGTACGCTGAATAACACCCGCTTTGACACACCGGTGGGTGAGTGGTCACTCAGTAAAGCAATGGCGCTGACCTATCTGAATGAAAAACAGGAAGTGACCATCGGCACCCATTGCTGGGTAAATCCGGATGCCCGTATCTGTGTGCCGAAACCGATCACCGCCGGGGCTTCCGGTAATGCATCTGTTGCCCTTGAACGTTTTGATCTGGCGATGATTAAACCATTCCTTGGCCCGGATACCCGGCTGGACGGCGTATTCAGCGGTAATGTCAATGTCCGCTGGTTTGCGGACGGTTCACAGCCGGTGGTGGATGCCTCCCTGAAAGGCAACGGTGTGAAGGTGGTGCAGAACCTCGACGGCACGAATCTGCCGGTTGCATTTGATACCCTGACCATGACCGCCGCCATGAAGAACGGCAAACTCAATCTTCAGTGGCTGATTGCTATCGCCGGTAACGGGAAAATTAACGGTAATGTCCAGATTTCTGATCTGGAGAAACGCCGCCAGCTGAGCGGGAATGTCGGGATCGATAATATCTCGCTGGATCTGCTGAAACCATTGCTCGGCAAAGGGGATAAAGCTACCGGGCGGCTGAATGCGGGGCTGCGTCTGGGCGGTAATGCTGCATCACCGCTGCTGTTTGGCCAGCTGGGATTATCAGATCTCGCCGTCAGCGGCCGTCTGCTGCCGTTTGATATCACAACCGGCGGACTGACCGTGAACTTTGATGGTGCCCGTTCTGATCTCAGCGGAAACATCAAAACGCCGGAAGGTTATCTTAACCTCAGCGGTAACGCGGACTGGCGCAGAATGGATGCCTGGAGTGCGCGGATCTTCGCACAGGGCGATAAACTGCGCGTTTCCCTGCCGCCGATGATCCGGATTGATGTCAGCCCGGATCTGGTCTTTGAGGCCACTCCGTCGATGCTGAAACTGGACGGTACGGTCAATATTCCGTGGGCGCGGATCACCGTGCATGAAGTACCGGAGTCCGCCGTCAGCGCCACATCCGACGAAGTGATGCTGGATGACAACTTACAGCCAATCCGTGAGAAACAGACCAGTATTCCGATCCTGAGTAATCTGCGGATCCATATCGGTGATGATGTGCTGCTCGATGCCTTTGGTCTGAAAGCAAAACTCACCGGAGATCTGAAAGTCGCCCAGGATAAACAGGGACTGGGGCTCAACGGCCAGGTGGATATTCCGCGCGGGCGTTTCCATGCTTACGGGCAGGATCTGCTGGTGCGCAAAGGACAGATCCTGTTCTCCGGTCCGGCTGATCAGCCGTTCCTTAATCTGGAAGCTATCCGTAACCCGGATAACACTGCTAACGGCGTGATCGCGGGTGTCCGGGTGACCGGGCTTGCCGACAGACCGAAAGTGGAAATATTTTCTGATCCGGCCATGTCCCAGGAAAATGCGCTCTCTTATCTGCTGCGCGGTGAGGGGCTGGATTCCGGTGACGCAGACAGTTCGCAGATGACATCCATGCTTATCAGCCTCGGGGTGGCACAAAGCGGGCAGTTAGTCGGAAAAATTGGTGAAACATTCGGTATTTCGGATCTGGCGCTGGATACCCAGGGTGTGGGCGATAAGTCGCAGGTTGTGGTCAGCGGTAAGATAACCAACGACCTGCAGGTAAAATATGGTGTCGGTATATTTGACTCCTTAGCGACCTTAACGTTACGCTATAGGTTAATGCCCAGGTTATATCTGGAAGCGGTGTCTGGTGTTAACCAGGCGATCGATCTGCTTTATCAGTTTGAGTTTTAATATATGCGAGTGATCGTTTATGGCAGTTTGCGGCAGAAACAGGGCAACCA