Homologs in group_269

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7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05330 FBDBKF_05330 100.0 Morganella morganii S1 marC YchE family NAAT transporter
EHELCC_12260 EHELCC_12260 100.0 Morganella morganii S2 marC YchE family NAAT transporter
LHKJJB_12460 LHKJJB_12460 100.0 Morganella morganii S3 marC YchE family NAAT transporter
HKOGLL_11075 HKOGLL_11075 100.0 Morganella morganii S5 marC YchE family NAAT transporter
F4V73_RS05785 F4V73_RS05785 96.3 Morganella psychrotolerans - YchE family NAAT transporter
PMI_RS05000 PMI_RS05000 31.9 Proteus mirabilis HI4320 - MarC family NAAT transporter
PMI_RS07190 PMI_RS07190 76.2 Proteus mirabilis HI4320 - YchE family NAAT transporter

Distribution of the homologs in the orthogroup group_269

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_269

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P25743 1.28e-101 295 68 0 215 3 ychE UPF0056 membrane protein YhcE Escherichia coli (strain K12)
Q8K9Q4 2.74e-78 236 54 1 215 3 BUsg_257 UPF0056 membrane protein BUsg_257 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57355 2.29e-74 226 56 0 215 3 BU267 UPF0056 membrane protein BU267 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89AL9 3.71e-69 213 53 1 210 3 bbp_248 UPF0056 membrane protein bbp_248 Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q9UZ49 2.32e-34 124 35 2 197 3 PYRAB13050 UPF0056 membrane protein PYRAB13050 Pyrococcus abyssi (strain GE5 / Orsay)
O58499 4.06e-33 121 33 2 200 3 PH0760 UPF0056 membrane protein PH0760 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
O66819 1.27e-31 117 30 3 201 3 aq_540 UPF0056 membrane protein aq_540 Aquifex aeolicus (strain VF5)
O32244 1.63e-30 114 32 1 209 3 yvbG UPF0056 membrane protein YvbG Bacillus subtilis (strain 168)
O28169 9.65e-27 105 30 5 207 3 AF_2111 UPF0056 membrane protein AF_2111 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q58382 3.18e-25 101 31 2 197 3 MJ0972 UPF0056 membrane protein MJ0972 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q59071 3.52e-24 98 32 1 202 3 MJ1677 UPF0056 membrane protein MJ1677 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
A8AGR9 5.62e-24 97 29 2 194 3 marC UPF0056 inner membrane protein MarC Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q1RBN8 8.94e-24 97 29 2 194 3 marC UPF0056 inner membrane protein MarC Escherichia coli (strain UTI89 / UPEC)
Q8FHE5 8.94e-24 97 29 2 194 3 marC UPF0056 inner membrane protein MarC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
A1ABA8 8.94e-24 97 29 2 194 3 marC UPF0056 inner membrane protein MarC Escherichia coli O1:K1 / APEC
Q3Z1R5 1.69e-23 96 29 2 194 3 marC UPF0056 inner membrane protein MarC Shigella sonnei (strain Ss046)
P0AEY2 1.69e-23 96 29 2 194 3 marC UPF0056 inner membrane protein MarC Shigella flexneri
Q0T4K0 1.69e-23 96 29 2 194 3 marC UPF0056 inner membrane protein MarC Shigella flexneri serotype 5b (strain 8401)
Q32G29 1.69e-23 96 29 2 194 3 marC UPF0056 inner membrane protein MarC Shigella dysenteriae serotype 1 (strain Sd197)
Q320K3 1.69e-23 96 29 2 194 3 marC UPF0056 inner membrane protein MarC Shigella boydii serotype 4 (strain Sb227)
P0AEY1 1.69e-23 96 29 2 194 1 marC UPF0056 inner membrane protein MarC Escherichia coli (strain K12)
Q0THR0 1.69e-23 96 29 2 194 3 marC UPF0056 inner membrane protein MarC Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B1XEB6 1.69e-23 96 29 2 194 3 marC UPF0056 inner membrane protein MarC Escherichia coli (strain K12 / DH10B)
A7ZLY5 1.69e-23 96 29 2 194 3 marC UPF0056 inner membrane protein MarC Escherichia coli O139:H28 (strain E24377A / ETEC)
Q7ADY8 2.57e-23 96 29 2 194 3 marC UPF0056 inner membrane protein MarC Escherichia coli O157:H7
B1IRT1 5.79e-23 95 29 2 194 3 marC UPF0056 inner membrane protein MarC Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A082 5.79e-23 95 29 2 194 3 marC UPF0056 inner membrane protein MarC Escherichia coli O9:H4 (strain HS)
B1LF84 8.65e-23 94 29 2 194 3 marC UPF0056 inner membrane protein MarC Escherichia coli (strain SMS-3-5 / SECEC)
Q5PN94 1.13e-22 94 29 3 194 3 marC UPF0056 inner membrane protein MarC Salmonella paratyphi A (strain ATCC 9150 / SARB42)
P0A2L5 1.75e-22 94 29 3 194 3 marC UPF0056 inner membrane protein MarC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2L6 1.75e-22 94 29 3 194 3 marC UPF0056 inner membrane protein MarC Salmonella typhi
A9MYZ8 1.75e-22 94 29 3 194 3 marC UPF0056 inner membrane protein MarC Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q57PB6 1.75e-22 94 29 3 194 3 marC UPF0056 inner membrane protein MarC Salmonella choleraesuis (strain SC-B67)
A9MRQ1 2.84e-21 90 29 3 194 3 marC UPF0056 inner membrane protein MarC Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
P57524 6.09e-18 81 29 5 191 3 BU449 UPF0056 membrane protein BU449 Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q89AB7 1.45e-17 80 27 3 191 3 bbp_399 UPF0056 membrane protein bbp_399 Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P67145 1.68e-17 80 27 5 193 3 yhgN UPF0056 inner membrane protein YhgN Shigella flexneri
P67143 1.68e-17 80 27 5 193 1 yhgN UPF0056 inner membrane protein YhgN Escherichia coli (strain K12)
P67144 1.68e-17 80 27 5 193 3 yhgN UPF0056 inner membrane protein YhgN Escherichia coli O157:H7
Q8K9B4 1.08e-15 75 29 6 192 3 BUsg_434 UPF0056 membrane protein BUsg_434 Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q9V274 1.41e-08 56 25 4 140 3 PYRAB02000 UPF0056 membrane protein PYRAB02000 Pyrococcus abyssi (strain GE5 / Orsay)
O57953 1.57e-08 56 29 4 135 3 PH0214 UPF0056 membrane protein PH0214 Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
Q9PL67 1.64e-05 47 23 6 195 3 TC_0241 UPF0056 membrane protein TC_0241 Chlamydia muridarum (strain MoPn / Nigg)
Q9Z6P9 9.08e-05 45 21 6 195 3 CPn_1010 UPF0056 membrane protein CPn_1010/CP_0843/CPj1010/CpB1048 Chlamydia pneumoniae

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_12600
Feature type CDS
Gene marC
Product YchE family NAAT transporter
Location 107878 - 108525 (strand: 1)
Length 648 (nucleotides) / 215 (amino acids)

Contig

Accession ZDB_527
Length 181446 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_269
Orthogroup size 8
N. genomes 7

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Genomic region

Domains

PF01914 MarC family integral membrane protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2095 Amino acid transport and metabolism (E) E Small neutral amino acid transporter SnatA, MarC family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05595 multiple antibiotic resistance protein - -

Protein Sequence

MGNTLLDFSGYLKFFVGLFALVNPVGILPVFMSMTNYQTAAVRNKTNMIANFSVAVILCTSLLVGDKILIMFGISIESFRIAGGTLIVLIAMSMISGKLGEDKQNKQEQSETAIRDNIGVVPLALPLMAGPGAISSCVVWSARWQGWQNFFGLALTSIVFAFCCWLLFRSAGLWVKYLGQTGINVVTRIMGLMLMSLGIELIITGMKMSFPGLLS

Flanking regions ( +/- flanking 50bp)

GTTATTATCAGCAGGCTATCACTGTATTATCATCAGGTTGAGGATCCTTTGTGGGCAACACTTTGCTGGATTTTTCCGGTTATTTAAAATTTTTTGTCGGCTTATTTGCCTTAGTCAACCCGGTCGGTATTTTGCCGGTCTTTATGAGCATGACAAATTATCAGACTGCCGCAGTGCGCAATAAGACCAACATGATTGCGAACTTTTCGGTGGCCGTGATTTTGTGCACATCACTTCTGGTCGGCGATAAGATCCTCATTATGTTCGGTATTTCCATCGAATCTTTCCGGATAGCGGGGGGGACACTGATTGTCCTCATCGCCATGTCCATGATCAGCGGTAAGCTGGGGGAAGATAAGCAGAACAAACAGGAGCAGTCGGAAACGGCTATCCGCGACAATATCGGTGTGGTGCCGCTGGCGCTGCCGCTGATGGCGGGGCCGGGGGCTATCAGTTCCTGTGTGGTCTGGAGTGCCCGCTGGCAGGGCTGGCAGAACTTTTTCGGACTGGCGCTGACCAGCATCGTATTCGCGTTCTGCTGCTGGCTGTTGTTCCGCTCCGCGGGACTGTGGGTAAAATACCTCGGACAAACCGGCATCAACGTAGTGACCCGTATTATGGGTCTGATGCTGATGTCATTAGGTATTGAGCTGATCATTACCGGCATGAAAATGAGTTTCCCGGGATTATTGTCATAATCACGTAGTTCATTATTATCAGAACGGGGCCATCGGCCCCGTTTTTATAT