Homologs in group_3588

Help

4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19815 FBDBKF_19815 100.0 Morganella morganii S1 - STY4528 family pathogenicity island replication protein
EHELCC_10540 EHELCC_10540 100.0 Morganella morganii S2 - STY4528 family pathogenicity island replication protein
LHKJJB_10470 LHKJJB_10470 100.0 Morganella morganii S3 - STY4528 family pathogenicity island replication protein
HKOGLL_16635 HKOGLL_16635 100.0 Morganella morganii S5 - STY4528 family pathogenicity island replication protein

Distribution of the homologs in the orthogroup group_3588

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3588

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_10885
Feature type CDS
Gene -
Product STY4528 family pathogenicity island replication protein
Location 132898 - 134094 (strand: 1)
Length 1197 (nucleotides) / 398 (amino acids)
In genomic island -

Contig

Accession ZDB_525
Length 191527 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3588
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Protein Sequence

MAVLPVDSVIRQTLTKMQHRIDEKAAAGEVTNAQSGLLFLGNVHDAVPRRLFLDSRLSPLDKMAWVMIRMYAQQNEGAVFPTYDELQLQLALPHSDKASRETISRALLMLRLTGWLSLCKRVRDKSGRVRGNIYTQHDEPLNAADAEYFDPRWLDTVEKACSHTNKTVRLTAIGVLKSIRNDDSMRHRHSRVALTEAWLAAPQTPAALAQSKHQNRTGTETEPGQKSPGTDPELSVQTSPKIPGSDPELSRKQRAEHSVRKPNGYVRSFTQSVKKTYVNTDTKLSWPVTVQERLSSADREMLKTQLCALPDSLGQRILDDLAVRMKTTEVRNVTAYLLANLKRAREGLFNTCSPVQIRPAVAATTVKTPEQCRETPVKRARQEVVSGTMAELRKVYFQ

Flanking regions ( +/- flanking 50bp)

GTGTCACTGAACACCGTCTGGTCGCTTATCAAAGAGTGGAGTGTTATCTGATGGCCGTGTTACCGGTTGACAGTGTGATCCGGCAGACACTGACAAAGATGCAGCACCGGATTGATGAAAAAGCCGCTGCCGGTGAAGTGACAAATGCGCAGAGCGGGTTACTGTTTCTCGGCAATGTGCATGACGCGGTACCGCGCCGTTTGTTTCTCGATAGCCGCCTGTCACCACTGGATAAAATGGCGTGGGTGATGATCCGCATGTATGCGCAGCAGAATGAGGGAGCAGTATTCCCGACCTACGACGAGTTACAGCTACAACTCGCACTGCCGCATTCAGATAAAGCATCCCGCGAGACTATCAGCAGGGCTTTACTGATGTTACGGCTGACCGGCTGGCTGAGCCTGTGCAAACGGGTCAGGGATAAATCCGGACGGGTACGCGGCAATATCTACACCCAGCACGACGAACCGCTCAATGCTGCCGATGCGGAATATTTTGATCCGCGCTGGCTGGATACGGTGGAAAAGGCGTGCAGCCACACCAATAAAACCGTTCGTCTGACAGCCATCGGGGTTCTGAAATCCATCCGGAATGACGACAGCATGCGGCACCGGCACTCCCGTGTGGCACTGACGGAAGCCTGGTTAGCCGCACCACAAACCCCCGCAGCACTTGCTCAGTCAAAACATCAGAACCGCACTGGTACGGAAACCGAACCAGGGCAAAAATCACCGGGTACGGATCCCGAACTCAGTGTACAGACATCCCCAAAAATACCGGGTTCGGATCCCGAACTCAGCCGGAAACAGCGGGCTGAGCACTCAGTTCGGAAACCGAACGGTTACGTACGTTCTTTTACACAGAGTGTAAAAAAGACGTACGTAAACACAGACACAAAATTATCTTGGCCTGTCACGGTGCAGGAGCGACTGAGCAGTGCTGACAGGGAAATGCTGAAAACTCAGCTCTGTGCATTGCCTGATTCACTGGGGCAACGGATTCTGGATGACTTGGCCGTGCGCATGAAAACCACCGAAGTCCGCAATGTCACCGCCTACCTGCTGGCAAACCTGAAGCGGGCACGGGAAGGGCTGTTTAATACCTGCAGCCCGGTACAGATACGACCTGCGGTAGCTGCAACGACTGTTAAAACTCCGGAGCAGTGCAGGGAAACGCCGGTCAAGCGGGCACGGCAGGAGGTTGTTTCGGGAACGATGGCTGAACTTCGGAAAGTGTATTTTCAGTGATGAAGGAAGCTGGCAGGGGGACTGTGTCAACACGAGAAAGTGAACATCAA