Homologs in group_3293

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09180 FBDBKF_09180 100.0 Morganella morganii S1 codB Purine-cytosine permease or related protein
EHELCC_10230 EHELCC_10230 100.0 Morganella morganii S2 codB Purine-cytosine permease or related protein
LHKJJB_10780 LHKJJB_10780 100.0 Morganella morganii S3 codB Purine-cytosine permease or related protein
HKOGLL_13840 HKOGLL_13840 100.0 Morganella morganii S5 codB Purine-cytosine permease or related protein

Distribution of the homologs in the orthogroup group_3293

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3293

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P94369 8.85e-21 98 29 14 439 3 yxlA Putative purine-cytosine permease YxlA Bacillus subtilis (strain 168)
Q12119 3.91e-10 65 28 10 281 3 FCY22 Purine-cytosine permease FCY22 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P17064 3.76e-09 62 28 10 262 1 FCY2 Purine-cytosine permease FCY2 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_10575
Feature type CDS
Gene codB
Product Purine-cytosine permease or related protein
Location 57618 - 59018 (strand: -1)
Length 1401 (nucleotides) / 466 (amino acids)
In genomic island -

Contig

Accession ZDB_525
Length 191527 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3293
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1457 Nucleotide transport and metabolism (F) F Purine-cytosine permease or related protein

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03457 nucleobase:cation symporter-1, NCS1 family - -

Protein Sequence

MSQQSVPSALNKTDPTIEELGIGLIPPSRQTKKPAELFFVWCAANIGILGVVYGAIIVSFGLSFFQSVLAAVVGVASFILVGITSIAGKIGRTTTLTLSRASFGKSGNIAPTAFCWFNLMGWEAVNIITGTLTLAALFTAIGLGSGHMMTAIALILFGGLTVLVSILGQNTVLLMQKWITRIFGAMTLFVVLWLLATADWQALISRPSGNWITGFLPAVSIIAAGTGISWAIAGADYSRDQSPSSSHSRIFGSVVGGAALPLLLLILTGILLTAQLPDLAAEENPIAAIGGLLPSWMAVPYLAAAVAGIVTIAVLSLYSASLNLLSMGIKLKQRTAVALDGVIVLAIAIYVLFVSGDFLGPFISFLVFCGLFLASWAAIFITDYYCKHKTAGYDEVSLYGDTGVIWPTFLCWLGGSVAGLLVTNTGFINGPFATGVFENSSLGLFVSFLVSMAAYRLTLMIKPVRS

Flanking regions ( +/- flanking 50bp)

CGTCTGGCACAGTTCAGACAGGAGTATGCCGCGACGAACAGGATGATGTCATGAGTCAGCAATCTGTACCTTCAGCGTTGAACAAAACCGATCCGACCATCGAAGAACTGGGTATCGGCCTGATCCCGCCTTCCCGGCAGACCAAAAAACCCGCCGAGCTATTCTTTGTCTGGTGTGCCGCCAATATCGGCATTCTCGGCGTGGTCTACGGCGCGATTATTGTGTCGTTCGGGCTTTCCTTCTTTCAGTCAGTTTTAGCGGCAGTGGTTGGTGTTGCCTCCTTTATTTTAGTGGGGATCACCAGTATCGCCGGTAAAATCGGCCGGACCACCACCCTCACCCTTTCCCGCGCCAGCTTCGGCAAAAGCGGTAATATCGCGCCGACGGCTTTCTGCTGGTTTAACCTGATGGGCTGGGAAGCGGTGAATATCATCACCGGCACCCTGACCCTGGCGGCGCTGTTCACCGCCATCGGGCTGGGCAGCGGACACATGATGACCGCTATCGCGCTGATACTGTTCGGCGGACTGACGGTGCTGGTCAGTATTCTCGGGCAGAACACCGTTTTGCTGATGCAGAAATGGATCACGCGTATTTTCGGGGCGATGACCCTGTTTGTCGTCCTCTGGCTGCTTGCGACCGCAGACTGGCAGGCGCTGATCAGCCGTCCTTCCGGTAACTGGATCACCGGTTTCCTGCCTGCGGTGTCCATTATCGCCGCCGGAACCGGGATCAGCTGGGCGATTGCCGGGGCAGATTACAGCCGCGACCAGAGCCCGTCCTCATCCCACAGCCGTATTTTCGGTTCGGTGGTCGGCGGGGCCGCGCTTCCTCTGCTGCTTCTGATCCTGACCGGTATTCTGCTGACCGCGCAACTGCCTGATCTGGCAGCGGAAGAGAACCCGATTGCCGCAATCGGCGGTCTGCTGCCGTCCTGGATGGCGGTACCGTATCTGGCCGCTGCGGTGGCAGGGATTGTCACTATCGCGGTACTCAGCCTCTATTCCGCCAGTCTCAACCTGCTGAGCATGGGCATCAAACTCAAACAGCGCACCGCCGTTGCTCTTGATGGCGTGATTGTGCTGGCGATCGCGATTTATGTTCTGTTTGTTTCCGGTGATTTCCTCGGGCCGTTTATTTCATTCCTGGTGTTCTGCGGATTGTTCCTCGCATCCTGGGCGGCGATTTTTATCACCGATTACTACTGCAAACACAAAACCGCCGGTTACGACGAAGTTTCGCTCTACGGCGACACCGGGGTTATCTGGCCGACCTTCCTGTGCTGGCTCGGCGGCTCGGTTGCCGGGCTGCTGGTCACCAACACCGGCTTTATTAACGGACCGTTTGCCACCGGTGTGTTTGAGAATTCCAGTCTGGGGCTGTTTGTCTCCTTCCTGGTGAGCATGGCGGCGTACCGCCTGACACTGATGATAAAACCGGTACGGAGTTAAACGGAACTGATGGATGTAACGTTACTGACACCACAGCGCCCGGTCGTGGT