Homologs in group_3384

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13175 FBDBKF_13175 100.0 Morganella morganii S1 - NYN domain-containing protein
EHELCC_08920 EHELCC_08920 100.0 Morganella morganii S2 - NYN domain-containing protein
LHKJJB_05020 LHKJJB_05020 100.0 Morganella morganii S3 - NYN domain-containing protein
HKOGLL_05895 HKOGLL_05895 100.0 Morganella morganii S5 - NYN domain-containing protein

Distribution of the homologs in the orthogroup group_3384

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3384

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_09245
Feature type CDS
Gene -
Product NYN domain-containing protein
Location 249777 - 250538 (strand: 1)
Length 762 (nucleotides) / 253 (amino acids)
In genomic island -

Contig

Accession ZDB_523
Length 257158 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3384
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF01936 NYN domain
PF12872 OST-HTH/LOTUS domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1432 General function prediction only (R) R NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation

Protein Sequence

MERDNKKIAVLIDADNAQASVLESILNEVSLMGDATVKRIYGDFTNQQSSCWKSILQKNAIKPVQQFAYTTGKNATDGTLIIDAMDLLYTQRFDAFCLVSSDSDFTGLALRIRESGLDVVGFGELKTPMAFRNACNKFINTEIYKDKQESFTSDKRPRTAVESTELIPKEEIFETLLDIANNLSDADEEWIHLGVLGGIMTKRKPDFDARNYGYRNLSTMMKSRPDLFEVKKGAEIGISTAAHLPYMKTKVKE

Flanking regions ( +/- flanking 50bp)

GCATTGTTACATCCAGAAAATGAATCCAGCTATATGGAAGATGATAAATAATGGAAAGAGATAATAAAAAAATTGCAGTTTTGATTGATGCAGATAATGCACAGGCGTCAGTGTTAGAAAGTATTCTTAATGAAGTTTCATTAATGGGAGATGCTACAGTTAAACGGATTTACGGTGACTTCACTAACCAACAAAGTTCATGTTGGAAATCTATTTTGCAAAAAAATGCAATTAAACCAGTTCAGCAGTTTGCATACACAACAGGAAAAAATGCAACTGATGGGACATTAATCATAGATGCAATGGATTTATTATATACTCAAAGATTTGATGCATTTTGTTTGGTATCTAGTGATAGCGACTTTACTGGATTGGCATTGCGGATAAGAGAGTCAGGCCTCGATGTTGTCGGATTCGGTGAGCTGAAAACACCAATGGCATTCAGAAATGCGTGCAATAAATTTATTAATACAGAAATATATAAAGATAAACAAGAATCATTTACTTCGGATAAAAGACCAAGAACAGCCGTTGAGTCGACTGAATTAATACCTAAAGAAGAAATATTTGAGACGTTATTAGATATAGCAAATAATCTCTCTGATGCAGATGAAGAATGGATTCACCTTGGTGTTCTGGGGGGGATCATGACTAAGAGAAAGCCTGATTTTGATGCAAGAAATTACGGATACCGAAATTTATCAACTATGATGAAAAGTAGGCCTGATCTTTTTGAGGTCAAAAAAGGTGCCGAAATTGGTATATCCACTGCTGCCCACCTCCCTTATATGAAGACAAAAGTAAAGGAGTGAAAGACATAGAATTATTTGCTTTTTGCATAAAATTGCCTTATTATCTCCAA