Homologs in group_3407

Help

4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13635 FBDBKF_13635 100.0 Morganella morganii S1 - DUF1436 domain-containing protein
EHELCC_08460 EHELCC_08460 100.0 Morganella morganii S2 - DUF1436 domain-containing protein
LHKJJB_05480 LHKJJB_05480 100.0 Morganella morganii S3 - DUF1436 domain-containing protein
HKOGLL_05435 HKOGLL_05435 100.0 Morganella morganii S5 - DUF1436 domain-containing protein

Distribution of the homologs in the orthogroup group_3407

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3407

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B3BM81 7.16e-23 92 37 1 139 1 cdiI4 Immunity protein CdiI-o11 Escherichia coli O157:H7 (strain EC869)
A0A0R4I987 1.2e-16 76 41 0 94 1 cdiI Immunity protein CdiI-YPIII Yersinia pseudotuberculosis serotype O:3 (strain YPIII)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_08785
Feature type CDS
Gene -
Product DUF1436 domain-containing protein
Location 169833 - 170339 (strand: 1)
Length 507 (nucleotides) / 168 (amino acids)
In genomic island -

Contig

Accession ZDB_523
Length 257158 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3407
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Domains

PF07262 CDI immunity protein

Protein Sequence

MNSINSDEFNAVVSFNEDYFYFLRMINHGLLIPDYLFGDIIIPVDAAIDNIGLSLKQVLTKNKDGESEGYYIFDHELNKENYKENIVKLMRLCGYKNKKLLFKKMNKCLVRQVGNIIKIKPLNHIKLEAWDGDGISETDDVIIPVSASDEELGNAVIEAFSRCKGRQF

Flanking regions ( +/- flanking 50bp)

AAACGATAAAAATATAGATATTAAAATAACCATTATAAAAGGTAATTAGTATGAATTCGATAAATTCGGATGAGTTTAATGCAGTCGTAAGTTTTAATGAAGATTATTTTTATTTTTTAAGGATGATTAATCATGGGTTGTTAATACCGGACTATTTATTTGGTGATATTATTATTCCTGTGGATGCAGCAATTGACAATATTGGCTTAAGTTTAAAGCAGGTTCTTACAAAAAATAAAGATGGAGAGTCTGAAGGTTATTATATATTTGATCATGAATTAAACAAGGAGAATTATAAAGAAAACATAGTAAAGTTAATGAGGTTATGCGGATATAAGAATAAAAAATTACTTTTTAAAAAAATGAATAAATGCCTTGTAAGGCAAGTTGGTAATATTATTAAAATAAAACCCCTAAACCATATTAAACTTGAAGCTTGGGACGGTGATGGTATATCAGAAACTGACGATGTCATTATTCCGGTATCGGCTTCAGATGAAGAGTTGGGTAATGCCGTTATTGAGGCGTTTTCCCGCTGTAAGGGAAGGCAATTCTGAGCTCTGTCCCCGGCGGTCACCGGGGACAGATGATCAGGTTCAGATAATCT