Homologs in group_3600

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19915 FBDBKF_19915 100.0 Morganella morganii S1 - Transcriptional regulator
EHELCC_07700 EHELCC_07700 100.0 Morganella morganii S2 - Transcriptional regulator
LHKJJB_06240 LHKJJB_06240 100.0 Morganella morganii S3 - Transcriptional regulator
HKOGLL_19095 HKOGLL_19095 100.0 Morganella morganii S5 - Transcriptional regulator

Distribution of the homologs in the orthogroup group_3600

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3600

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_08025
Feature type CDS
Gene -
Product Transcriptional regulator
Location 10479 - 10916 (strand: 1)
Length 438 (nucleotides) / 145 (amino acids)

Contig

Accession ZDB_523
Length 257158 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3600
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MTEEKFKIYVNIIRACRDYDCFTNSDAARYTETSEIFIRTYTTILHKIGSLIKTGMVKQGRHYIPQYAVAPDAVTRLYRYVREIRGEPEPNPVMKCPSKGMKRIKFCGRVVNKAFISPGFGRSAITDIDSRLKAVRNKDPETVLH

Flanking regions ( +/- flanking 50bp)

ATACGCAGCGCAGCCGGTAATTTACAGGATGATACTTCAGAGGATATATTATGACTGAGGAAAAATTTAAAATATACGTCAATATTATCCGGGCCTGCCGGGATTATGATTGCTTTACCAACAGTGATGCTGCGCGATATACAGAGACATCTGAAATCTTTATCCGCACATATACCACTATCCTGCATAAAATCGGCAGTCTGATAAAAACAGGGATGGTTAAGCAGGGACGGCATTATATCCCGCAATATGCGGTGGCACCGGATGCTGTCACGCGTCTGTACCGCTATGTCCGTGAAATCAGGGGAGAACCTGAACCTAATCCTGTAATGAAATGTCCGTCAAAGGGAATGAAGCGGATTAAATTCTGCGGACGGGTGGTCAATAAAGCCTTTATTTCGCCGGGGTTCGGACGTTCTGCGATTACCGATATTGATTCACGATTAAAGGCAGTAAGGAATAAAGATCCGGAAACGGTTTTACATTAATTTTTATATTTCAGACATTATCTGAGTTTACCTTTCAATAATATTTACGG