Homologs in group_3121

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19955 FBDBKF_19955 100.0 Morganella morganii S1 - Acid-shock protein
EHELCC_07660 EHELCC_07660 100.0 Morganella morganii S2 - Acid-shock protein
LHKJJB_06280 LHKJJB_06280 100.0 Morganella morganii S3 - Acid-shock protein
HKOGLL_19135 HKOGLL_19135 100.0 Morganella morganii S5 - Acid-shock protein
F4V73_RS02410 F4V73_RS02410 72.2 Morganella psychrotolerans - hypothetical protein

Distribution of the homologs in the orthogroup group_3121

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3121

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_07985
Feature type CDS
Gene -
Product Acid-shock protein
Location 4592 - 4810 (strand: -1)
Length 219 (nucleotides) / 72 (amino acids)

Contig

Accession ZDB_523
Length 257158 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3121
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Protein Sequence

MKHSALIVATLAGLFSFGAMASTPAPAVSAAHSGITATKADSHAKAIKHEAKVKSEKGKKAKKVKEEKQGAI

Flanking regions ( +/- flanking 50bp)

CATACCCGCTGAGCAGGTATAAATACTCCCGTAATCCTGAGGATATCATAATGAAACATTCAGCCCTTATTGTTGCAACTCTGGCCGGTTTATTCTCTTTCGGTGCAATGGCATCGACTCCGGCACCGGCAGTTTCCGCTGCGCATTCCGGTATTACCGCCACTAAAGCGGACAGCCATGCGAAAGCCATAAAACATGAAGCAAAAGTAAAAAGTGAAAAAGGGAAAAAAGCGAAAAAAGTTAAAGAAGAAAAACAGGGCGCAATCTGATCATTATAACGGTGTTATCCGCGGATTAAACCGGCGCCATACCGGGGCCG