Homologs in group_3220

Help

4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03000 FBDBKF_03000 100.0 Morganella morganii S1 - Secreted protein
EHELCC_07535 EHELCC_07535 100.0 Morganella morganii S2 - Secreted protein
LHKJJB_07395 LHKJJB_07395 100.0 Morganella morganii S3 - Secreted protein
HKOGLL_03535 HKOGLL_03535 100.0 Morganella morganii S5 - Secreted protein

Distribution of the homologs in the orthogroup group_3220

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3220

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_07860
Feature type CDS
Gene -
Product Secreted protein
Location 242655 - 242873 (strand: 1)
Length 219 (nucleotides) / 72 (amino acids)

Contig

Accession ZDB_522
Length 269640 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3220
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Protein Sequence

MKIELLFKIILLFVYLLPLTENGLPGFISNIQGIFIIRRYFILPEGITTAKNGKTGKITVVFQQKRNNNREK

Flanking regions ( +/- flanking 50bp)

CGGTTGTTACAAAAATACAACAATTGGTTGTATTATCACCGGTAAATACGATGAAAATTGAATTATTATTTAAAATCATACTGTTATTCGTGTATTTGCTGCCACTGACGGAAAACGGGCTGCCGGGATTCATTAGTAATATTCAGGGGATTTTTATTATCCGCCGGTATTTTATCTTGCCGGAGGGAATAACCACTGCAAAAAACGGAAAAACCGGCAAAATAACCGTGGTTTTTCAGCAGAAGAGAAATAACAACAGAGAAAAATAGTAATGAAAACTAAACAATATTAATGACCCGCCTTCTTGTTTCTGTTAATA