Homologs in group_116

Help

10 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03945 FBDBKF_03945 100.0 Morganella morganii S1 - integrating conjugative element protein
FBDBKF_16770 FBDBKF_16770 52.5 Morganella morganii S1 - integrating conjugative element protein
EHELCC_06590 EHELCC_06590 100.0 Morganella morganii S2 - integrating conjugative element protein
EHELCC_10690 EHELCC_10690 52.5 Morganella morganii S2 - integrating conjugative element protein
NLDBIP_11035 NLDBIP_11035 52.5 Morganella morganii S4 - integrating conjugative element protein
LHKJJB_06450 LHKJJB_06450 100.0 Morganella morganii S3 - integrating conjugative element protein
LHKJJB_10320 LHKJJB_10320 52.5 Morganella morganii S3 - integrating conjugative element protein
HKOGLL_04480 HKOGLL_04480 100.0 Morganella morganii S5 - integrating conjugative element protein
HKOGLL_16485 HKOGLL_16485 52.5 Morganella morganii S5 - integrating conjugative element protein
PMI_RS12700 PMI_RS12700 99.8 Proteus mirabilis HI4320 - integrating conjugative element protein

Distribution of the homologs in the orthogroup group_116

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_116

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_06915
Feature type CDS
Gene -
Product integrating conjugative element protein
Location 59440 - 60882 (strand: 1)
Length 1443 (nucleotides) / 480 (amino acids)

Contig

Accession ZDB_522
Length 269640 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_116
Orthogroup size 11
N. genomes 6

Actions

Genomic region

Protein Sequence

MMKAKRHTFFPPALTLMVLCSVPAFSVRAGLDFSAGANDIGYGANVSGAVSDKLYYNLGGGTVLSQPPGRSNLQRLGMSMGWNSDLMCGNFDIKTTVGNQLNGVTAGFKNLMSEVIQNATGAVASLPAMAIQRANPGLYEMLTNGVLQANVAFDKAQLNCQNMAKRMMDFSENNQWTQAAILEEAKNIINNSDGDAVKTDQQIQQSSGDKGVVWIGGKQRGGVGQPAIQPAQDFAQAGFNIMNGLPATSTAPVPAGQCNGAACRRFANSEEAAQVVTQVLGSKSVRTCTNPADCQSGGEAEQPGSSQPGTGLAPVLETTTRENLEQLHKLVNSRGAVGAAELAKLKTGSLTVSRGVIEALRRDPDKTALTQRLAGELAMADTMELALTMRRMLITGQGEPNAGNFPKAQEIGNQSVDQLDREIGMLQTEMEVRKSIANNAMLTVIERDQQRTQVNPATQTPDNTDVRVQGLEQNSDTGGR

Flanking regions ( +/- flanking 50bp)

ATGGGGCAAAAATTTCTGTACAGCACAACGTTTTAAGCAGGGATTTTAAGATGATGAAAGCAAAACGACACACGTTTTTTCCGCCGGCGCTGACACTGATGGTGTTATGCAGTGTACCGGCATTTTCTGTCCGGGCCGGGCTGGATTTTTCTGCCGGTGCGAATGATATCGGCTACGGCGCAAATGTTTCCGGCGCGGTCTCCGACAAACTGTACTACAACCTGGGCGGCGGCACGGTGTTATCCCAGCCGCCGGGGCGCAGTAATCTGCAACGTCTGGGGATGAGCATGGGCTGGAACAGTGATCTGATGTGCGGCAATTTTGATATCAAAACCACGGTGGGCAACCAGCTGAACGGGGTGACGGCCGGCTTTAAGAATCTGATGAGTGAGGTGATCCAGAATGCCACCGGGGCGGTGGCCAGTCTGCCGGCGATGGCTATCCAGCGGGCGAATCCCGGCCTGTATGAAATGCTGACCAACGGGGTGTTGCAGGCTAATGTGGCGTTTGATAAGGCGCAGCTGAACTGTCAGAACATGGCTAAACGGATGATGGACTTTTCAGAAAATAATCAGTGGACGCAGGCGGCGATCCTCGAAGAAGCAAAGAATATCATCAATAACAGTGACGGGGATGCGGTAAAAACTGACCAGCAAATTCAGCAAAGCAGTGGCGATAAAGGGGTTGTATGGATAGGCGGGAAACAGCGCGGTGGGGTTGGTCAGCCTGCGATTCAGCCGGCGCAGGATTTTGCACAGGCCGGCTTTAATATCATGAACGGTCTGCCGGCAACCAGTACGGCCCCGGTGCCGGCCGGCCAGTGTAACGGAGCCGCTTGCAGGCGCTTTGCCAACAGTGAGGAAGCCGCTCAGGTGGTCACACAGGTGCTGGGCAGCAAATCGGTCCGCACCTGCACCAATCCGGCGGATTGTCAGAGCGGCGGTGAGGCGGAGCAACCGGGCAGTTCCCAGCCAGGAACCGGGCTGGCACCGGTGCTGGAGACCACCACCCGGGAAAATTTGGAACAGCTGCATAAACTGGTGAACAGCCGGGGCGCGGTCGGGGCGGCAGAGTTGGCGAAACTGAAAACCGGCAGCCTGACGGTCTCCCGGGGGGTGATTGAAGCGCTGCGCCGGGATCCGGATAAAACGGCATTAACACAGCGTCTGGCCGGTGAGCTGGCGATGGCGGACACGATGGAGCTGGCGCTGACGATGCGCCGGATGCTGATCACCGGCCAGGGGGAGCCGAATGCCGGTAATTTTCCGAAAGCCCAGGAGATCGGTAACCAGTCGGTTGACCAGCTGGATCGCGAAATCGGGATGCTGCAAACGGAAATGGAAGTGCGTAAATCCATTGCCAATAACGCGATGCTGACGGTGATTGAGCGTGATCAGCAACGGACACAGGTGAACCCTGCCACCCAGACCCCAGATAATACGGATGTGCGTGTACAGGGACTGGAGCAAAACAGTGACACCGGAGGACGTTAAATGACGAAAGGAAAAACCGGGCGCCGGTTATGGCCGGTGCTGAAAGTAAC