Homologs in group_255

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7 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04040 FBDBKF_04040 100.0 Morganella morganii S1 - Lytic transglycosylase
EHELCC_06495 EHELCC_06495 100.0 Morganella morganii S2 - Lytic transglycosylase
LHKJJB_06355 LHKJJB_06355 100.0 Morganella morganii S3 - Lytic transglycosylase
HKOGLL_04575 HKOGLL_04575 100.0 Morganella morganii S5 - Lytic transglycosylase
PMI_RS12005 PMI_RS12005 29.9 Proteus mirabilis HI4320 - lytic transglycosylase domain-containing protein
PMI_RS12795 PMI_RS12795 100.0 Proteus mirabilis HI4320 - transglycosylase SLT domain-containing protein
PMI_RS18545 PMI_RS18545 25.7 Proteus mirabilis HI4320 - lytic transglycosylase domain-containing protein

Distribution of the homologs in the orthogroup group_255

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_255

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_06820
Feature type CDS
Gene -
Product Lytic transglycosylase
Location 42144 - 42782 (strand: 1)
Length 639 (nucleotides) / 212 (amino acids)

Contig

Accession ZDB_522
Length 269640 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_255
Orthogroup size 8
N. genomes 6

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Genomic region

Domains

PF01464 Transglycosylase SLT domain

Protein Sequence

MRKNSLLTLVLLLFSVPLPAREVPPGYREVARQENVPAEALYSLALTESSWTLPAHHPQAGEIHPWPWTLNVAGKGYRYPTRQAAWQALQSFLQTTSPRRIDVGIAQVNWGWNGHHFRSAWEAFDPYTNLHVAARILRRCYEASPGSWIRAAGCYHHPAGGQPAVRYKNSVRRQLATLTGGTQPVPAHLPAVSTDRAVSFVWIEPENKTDAK

Flanking regions ( +/- flanking 50bp)

AGTTACCGGATGGGCGGTGGCGTCCGCTCACACCTTAATCCGGAGGCGTGATGCGTAAAAATTCCCTGCTCACTCTTGTCCTGCTGCTGTTTTCCGTGCCGTTACCGGCTCGGGAGGTGCCGCCGGGCTACCGTGAGGTGGCCCGGCAGGAGAATGTACCAGCAGAAGCCCTGTATTCCCTGGCACTGACGGAGTCATCCTGGACATTACCGGCACATCACCCGCAGGCCGGTGAAATCCATCCCTGGCCGTGGACGCTGAATGTGGCTGGTAAAGGATACCGTTATCCGACACGGCAGGCCGCCTGGCAGGCTTTACAGTCGTTTTTACAGACGACATCCCCCAGACGTATTGATGTGGGGATTGCACAGGTGAACTGGGGCTGGAACGGGCATCACTTCCGTTCCGCCTGGGAGGCCTTTGATCCTTATACCAATTTGCATGTGGCCGCCCGCATCCTGCGCCGCTGTTATGAGGCGTCACCGGGTAGTTGGATCCGTGCCGCCGGCTGTTATCACCATCCGGCGGGCGGTCAGCCCGCAGTACGCTATAAAAATAGTGTCCGGCGTCAGCTGGCGACACTGACGGGCGGTACACAACCCGTTCCCGCTCATTTACCGGCAGTCAGTACAGATCGGGCTGTATCGTTTGTGTGGATAGAACCGGAGAACAAAACCGATGCGAAATAATCCTGAAGAAAAGACAACGCGAGCCTTTTATCCCCTGCCCGTCTTGGGGA