Homologs in group_1785

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13020 FBDBKF_13020 100.0 Morganella morganii S1 traB Uncharacterized conserved protein YbaP, TraB family
EHELCC_06335 EHELCC_06335 100.0 Morganella morganii S2 traB Uncharacterized conserved protein YbaP, TraB family
LHKJJB_03535 LHKJJB_03535 100.0 Morganella morganii S3 traB Uncharacterized conserved protein YbaP, TraB family
HKOGLL_07010 HKOGLL_07010 100.0 Morganella morganii S5 traB Uncharacterized conserved protein YbaP, TraB family
F4V73_RS16205 F4V73_RS16205 84.4 Morganella psychrotolerans - TraB/GumN family protein
PMI_RS10720 PMI_RS10720 47.0 Proteus mirabilis HI4320 - TraB/GumN family protein

Distribution of the homologs in the orthogroup group_1785

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1785

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77301 1.23e-80 246 50 3 258 4 ybaP Uncharacterized protein YbaP Escherichia coli (strain K12)
Q83M36 3.44e-80 245 50 3 258 4 ybaP Uncharacterized protein YbaP Shigella flexneri

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_06655
Feature type CDS
Gene traB
Product Uncharacterized conserved protein YbaP, TraB family
Location 321362 - 322171 (strand: 1)
Length 810 (nucleotides) / 269 (amino acids)

Contig

Accession ZDB_521
Length 325332 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1785
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF01963 TraB/PrgY/gumN family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3735 Function unknown (S) S Uncharacterized conserved protein YbaP, TraB family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09973 uncharacterized protein - -

Protein Sequence

MKTLFRRLKDYLIPPDPQGGCTWPSVDLTLPGDISLHLVGSIHMGSEAMYPLPGPLLERINRADGLIVEADITRPAPPFPGQDPEFPRLPVSERLPEHLRDDYRRYCEEQRQPVQTLDTLPAWQVALILQSAQAQSLGLRPHYGIDYQMLNAAHGQNIPVFELEGTQAQLQMLLDFPDEGLSLLEDTLAYWHDNARALQIMLGWWLDYRPEKLTQPLPATFSEQTYQHLMISRNDAWKTRLIQLPPGNYVVAVGALHLYGDHNLPSILC

Flanking regions ( +/- flanking 50bp)

AAGCCCGCGCTTGCAGTCAACTAAGGTATCGTTTCACGACAGGAGTCGTCATGAAAACACTGTTCCGCCGGCTGAAAGATTACCTTATCCCGCCTGATCCGCAGGGTGGCTGCACCTGGCCTTCGGTTGACCTCACATTGCCCGGGGATATCTCACTGCATCTGGTCGGCAGTATTCATATGGGATCGGAAGCCATGTACCCGCTGCCCGGCCCGCTGCTGGAAAGAATCAATCGTGCTGATGGCCTGATTGTGGAAGCGGATATCACCCGTCCGGCACCGCCGTTCCCGGGACAGGACCCTGAATTCCCCCGTCTGCCGGTAAGTGAGCGCTTACCGGAGCACCTGAGAGATGACTACCGCCGCTATTGTGAGGAACAGCGTCAGCCGGTACAGACGCTGGATACCCTGCCCGCCTGGCAGGTGGCGCTGATCCTGCAGTCCGCCCAGGCACAAAGCCTCGGGCTGCGTCCGCATTACGGCATTGATTATCAGATGCTCAATGCCGCTCACGGACAGAATATCCCCGTTTTTGAGCTGGAAGGCACACAGGCACAGTTACAGATGCTGCTGGATTTCCCGGACGAAGGGCTGAGCCTGCTGGAAGATACCCTGGCCTACTGGCATGACAATGCCCGCGCACTTCAGATTATGCTCGGCTGGTGGCTGGATTACCGGCCGGAAAAACTCACGCAGCCGCTGCCCGCCACCTTCAGCGAGCAGACGTATCAGCATCTGATGATAAGCCGCAACGACGCCTGGAAAACCAGGCTGATACAGCTGCCGCCCGGCAATTATGTGGTAGCGGTCGGCGCACTGCATCTTTACGGCGACCATAATCTGCCGTCCATTTTGTGTTAAACTGGCAGGCCTTGTGACACTGCCGTCTGAATTATCTGCAAGGAAAGACC