Homologs in group_3316

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10910 FBDBKF_10910 100.0 Morganella morganii S1 lysR DNA-binding transcriptional regulator, LysR family
EHELCC_05315 EHELCC_05315 100.0 Morganella morganii S2 lysR DNA-binding transcriptional regulator, LysR family
LHKJJB_02515 LHKJJB_02515 100.0 Morganella morganii S3 lysR DNA-binding transcriptional regulator, LysR family
HKOGLL_15895 HKOGLL_15895 100.0 Morganella morganii S5 lysR DNA-binding transcriptional regulator, LysR family

Distribution of the homologs in the orthogroup group_3316

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3316

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P43011 2.65e-52 176 34 1 284 3 HI_1364 Uncharacterized HTH-type transcriptional regulator HI_1364 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P72131 1.12e-50 173 37 2 296 1 ptxR HTH-type transcriptional regulator PtxR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P67662 1.47e-49 170 33 0 284 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli (strain K12)
P67663 1.47e-49 170 33 0 284 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P67664 1.47e-49 170 33 0 284 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O157:H7
P52689 5.36e-45 158 29 2 297 3 ltrA Probable HTH-type transcriptional regulator LtrA Klebsiella pneumoniae
Q9JPU9 1.49e-44 156 35 5 291 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup C (strain 8013)
Q9JXW7 3.18e-44 155 35 5 291 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P37641 2.46e-41 148 34 4 291 3 yhjC Uncharacterized HTH-type transcriptional regulator YhjC Escherichia coli (strain K12)
P30864 9.29e-41 147 31 5 292 3 yafC Uncharacterized HTH-type transcriptional regulator YafC Escherichia coli (strain K12)
P76250 1.09e-38 141 32 2 284 1 dmlR HTH-type transcriptional regulator DmlR Escherichia coli (strain K12)
P75836 2.38e-36 135 29 4 291 3 ycaN Uncharacterized HTH-type transcriptional regulator YcaN Escherichia coli (strain K12)
A0A0H2ZDG9 1.03e-34 131 27 5 309 3 PA14_22550 HTH-type transcriptional repressor PA14_22550 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q01610 1.35e-33 128 31 4 271 3 PA2220 Putative transcriptional regulator Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q1R6S1 3.81e-33 127 29 2 283 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain UTI89 / UPEC)
Q8FDH0 3.81e-33 127 29 2 283 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P45463 4.18e-33 127 29 2 283 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain K12)
Q0TD46 4.69e-33 127 29 2 283 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q8XBK9 7.83e-33 126 29 2 283 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O157:H7
P37459 8.03e-29 115 28 7 300 3 sinR Probable HTH-type transcriptional regulator SinR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P77333 1.18e-28 115 28 4 288 1 pgrR HTH-type transcriptional regulator PgrR Escherichia coli (strain K12)
P45099 4.81e-19 89 28 4 278 3 gcvA Glycine cleavage system transcriptional activator homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0A9F6 3.71e-17 83 27 8 307 1 gcvA Glycine cleavage system transcriptional activator Escherichia coli (strain K12)
P0A9F7 3.71e-17 83 27 8 307 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F8 3.71e-17 83 27 8 307 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O157:H7
P27111 4.94e-15 77 32 1 128 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
Q8X4M5 8.26e-15 77 32 1 128 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
A5F9F9 2.32e-14 75 26 5 275 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P0C6D1 2.56e-14 75 26 5 275 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P96194 1.27e-13 70 39 0 96 3 None Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region Azotobacter vinelandii
P52660 3.89e-13 72 25 7 251 3 blaA HTH-type transcriptional regulator BlaA Proteus vulgaris
P96725 1.06e-12 70 24 10 310 3 ywqM Uncharacterized HTH-type transcriptional regulator YwqM Bacillus subtilis (strain 168)
P42507 4.12e-12 68 26 1 169 3 hvrB AhcY transcriptional activator HvrB Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
P55576 7.38e-12 68 24 5 288 3 NGR_a02420 Uncharacterized HTH-type transcriptional regulator y4mQ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P46068 1.16e-11 67 22 4 297 2 dsdC HTH-type transcriptional regulator DsdC Escherichia coli (strain K12)
P44821 1.44e-11 67 28 0 128 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P20668 2.21e-11 67 28 0 121 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
P39592 6.51e-11 65 22 8 292 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
O06703 7.62e-11 65 26 4 257 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
P55181 8.86e-11 65 29 0 121 3 yxjO Uncharacterized HTH-type transcriptional regulator YxjO Bacillus subtilis (strain 168)
O32255 1.1e-10 64 30 1 122 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
Q57083 1.16e-10 64 23 8 299 1 perR HTH-type transcriptional regulator PerR Escherichia coli (strain K12)
O34685 1.17e-10 64 31 1 120 1 yofA HTH-type transcriptional regulator YofA Bacillus subtilis (strain 168)
P37682 2.81e-10 63 23 8 325 3 yiaU Uncharacterized HTH-type transcriptional regulator YiaU Escherichia coli (strain K12)
P14145 3.58e-10 63 26 4 252 3 ampR HTH-type transcriptional activator AmpR Rhodobacter capsulatus
O19892 4e-10 63 35 2 145 3 rbcR Probable RuBisCO transcriptional regulator Cyanidium caldarium
P45461 6.57e-10 62 26 6 252 3 ampR HTH-type transcriptional activator AmpR Yersinia enterocolitica
Q04778 6.81e-10 62 24 5 225 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
P0ACR4 8.32e-10 62 25 7 281 1 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli (strain K12)
P0ACR5 8.32e-10 62 25 7 281 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACR6 8.32e-10 62 25 7 281 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O157:H7
P94387 1.18e-09 62 29 4 158 3 ycgK Uncharacterized HTH-type transcriptional regulator YcgK Bacillus subtilis (strain 168)
O07906 1.43e-09 61 30 1 120 3 yraN Uncharacterized HTH-type transcriptional regulator YraN Bacillus subtilis (strain 168)
P0ACR8 1.53e-09 61 28 1 123 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Shigella flexneri
P0ACR7 1.53e-09 61 28 1 123 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Escherichia coli (strain K12)
P33634 1.91e-09 61 23 8 272 3 yfiE Uncharacterized HTH-type transcriptional regulator YfiE Escherichia coli (strain K12)
P25544 1.95e-09 61 24 7 298 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
A7Z5E4 2.22e-09 60 30 3 138 3 yofA HTH-type transcriptional regulator YofA Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
P52683 2.33e-09 60 27 6 173 3 smeR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Serratia marcescens
P67668 2.78e-09 60 46 0 63 3 BQ2027_MB2303C Uncharacterized HTH-type transcriptional regulator Mb2303c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WMF3 2.78e-09 60 46 0 63 1 Rv2282c Uncharacterized HTH-type transcriptional regulator Rv2282c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMF2 2.78e-09 60 46 0 63 3 MT2340 Uncharacterized HTH-type transcriptional regulator MT2340 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
A0T0V5 3.74e-09 60 27 2 148 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
Q85G62 4.08e-09 60 32 0 119 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)
P52676 4.6e-09 60 28 7 183 3 nmcR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Enterobacter cloacae
P52686 4.73e-09 60 29 4 134 3 sdsB SDS degradation transcriptional activation protein Pseudomonas sp. (strain ATCC 19151)
P48271 5.14e-09 60 34 3 150 3 rbcR Probable RuBisCO transcriptional regulator Cyanophora paradoxa
Q47005 6.04e-09 59 28 3 149 3 nac Nitrogen assimilation regulatory protein nac Escherichia coli (strain K12)
Q8YQ82 8.54e-09 59 31 0 119 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
A2CI69 9.04e-09 59 28 1 145 3 rbcR Probable RuBisCO transcriptional regulator Chlorokybus atmophyticus
Q08597 1e-08 58 29 4 149 3 nac Nitrogen assimilation regulatory protein nac Klebsiella aerogenes
Q3MCB5 1.16e-08 58 31 0 119 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)
Q6B936 1.48e-08 58 32 3 145 3 rbcR Probable RuBisCO transcriptional regulator Gracilaria tenuistipitata var. liui
A4QH19 2.03e-08 58 29 1 131 1 shiR HTH-type transcriptional regulator ShiR Corynebacterium glutamicum (strain R)
P73123 2.39e-08 58 31 0 119 3 rbcR Probable RuBisCO transcriptional regulator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P94501 2.98e-08 57 22 6 259 1 gltR HTH-type transcriptional regulator GltR Bacillus subtilis (strain 168)
O34827 4.31e-08 57 20 11 313 3 ykuM Uncharacterized HTH-type transcriptional regulator YkuM Bacillus subtilis (strain 168)
P49518 4.4e-08 57 27 2 145 3 rbcR Probable RuBisCO transcriptional regulator Trieres chinensis
Q1XDT2 5.29e-08 57 31 3 145 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
P77309 5.53e-08 56 27 1 121 3 yneJ Uncharacterized HTH-type transcriptional regulator YneJ Escherichia coli (strain K12)
P39647 5.66e-08 56 22 10 271 1 cysL HTH-type transcriptional regulator CysL Bacillus subtilis (strain 168)
Q765S2 6.19e-08 56 24 6 264 3 allS HTH-type transcriptional activator AllS Klebsiella pneumoniae
P51205 6.36e-08 56 31 3 145 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
A0T0G2 7.16e-08 56 24 1 145 3 rbcR Probable RuBisCO transcriptional regulator Phaeodactylum tricornutum (strain CCAP 1055/1)
P0ACQ9 1.1e-07 55 23 9 292 3 tdcA HTH-type transcriptional regulator TdcA Shigella flexneri
P0ACQ7 1.1e-07 55 23 9 292 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli (strain K12)
P0ACQ8 1.1e-07 55 23 9 292 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli O157:H7
Q57748 1.14e-07 55 21 7 298 3 MJ0300 Uncharacterized HTH-type transcriptional regulator MJ0300 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P42722 1.26e-07 55 23 5 252 3 cfxR HTH-type transcriptional regulator CfxR Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
Q9S4Y7 1.66e-07 55 29 3 151 3 allS HTH-type transcriptional activator AllS Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PCH2 1.66e-07 55 29 3 151 3 allS HTH-type transcriptional activator AllS Salmonella paratyphi A (strain ATCC 9150 / SARB42)
P94403 1.75e-07 55 23 12 311 3 bsdA HTH-type transcriptional regulator BsdA Bacillus subtilis (strain 168)
Q8FK66 1.78e-07 55 28 3 153 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TKD7 1.78e-07 55 28 3 153 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q57S50 1.9e-07 55 29 3 151 3 allS HTH-type transcriptional activator AllS Salmonella choleraesuis (strain SC-B67)
P12529 2.39e-07 54 26 4 180 1 ampR HTH-type transcriptional activator AmpR Citrobacter freundii
P0ACR0 2.43e-07 55 28 3 151 1 allS HTH-type transcriptional activator AllS Escherichia coli (strain K12)
P0ACR1 2.43e-07 55 28 3 151 3 allS HTH-type transcriptional activator AllS Escherichia coli O157:H7
P34818 2.92e-07 54 26 6 264 3 trpI HTH-type transcriptional regulator TrpI Pseudomonas syringae pv. syringae
B4TNR5 2.92e-07 54 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Salmonella schwarzengrund (strain CVM19633)
B5FN59 2.98e-07 54 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Salmonella dublin (strain CT_02021853)
P0A2Q0 3.06e-07 54 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q1 3.06e-07 54 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhi
B5BIR0 3.06e-07 54 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain AKU_12601)
C0Q2U0 3.06e-07 54 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi C (strain RKS4594)
A9MXD5 3.06e-07 54 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJZ0 3.06e-07 54 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TAZ8 3.06e-07 54 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Salmonella heidelberg (strain SL476)
B5EZ22 3.06e-07 54 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Salmonella agona (strain SL483)
B4SYF7 3.09e-07 54 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Salmonella newport (strain SL254)
O35038 3.35e-07 54 28 2 145 3 ytlI HTH-type transcriptional regulator YtlI Bacillus subtilis (strain 168)
Q1RF30 3.58e-07 54 28 3 151 3 allS HTH-type transcriptional activator AllS Escherichia coli (strain UTI89 / UPEC)
A1A8H0 3.58e-07 54 28 3 151 3 allS HTH-type transcriptional activator AllS Escherichia coli O1:K1 / APEC
P52666 4.01e-07 54 28 8 187 3 budR HTH-type transcriptional regulator BudR Raoultella terrigena
Q8Z8R3 4.45e-07 54 29 3 151 3 allS HTH-type transcriptional activator AllS Salmonella typhi
Q1R4H3 4.7e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain UTI89 / UPEC)
P59369 4.7e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TAV4 4.7e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N260 4.7e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O81 (strain ED1a)
B7MGH6 4.7e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O45:K1 (strain S88 / ExPEC)
B7NU32 5.06e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q3YVK2 5.21e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Shigella sonnei (strain Ss046)
P0A8S0 5.21e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri
Q0SYV7 5.21e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri serotype 5b (strain 8401)
Q31UM0 5.21e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 4 (strain Sb227)
B1LLU0 5.21e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SMS-3-5 / SECEC)
P0A8R9 5.21e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12)
B1IWY2 5.21e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6M0 5.21e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O9:H4 (strain HS)
B1X9Y2 5.21e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / DH10B)
C4ZZ35 5.21e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / MC4100 / BW2952)
B7UMM1 5.21e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
Q329U3 5.3e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Shigella dysenteriae serotype 1 (strain Sd197)
B6I4A0 5.3e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SE11)
B7M5B2 5.3e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O8 (strain IAI1)
B5YY14 5.3e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAW1 5.3e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7
B7L8A6 5.3e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain 55989 / EAEC)
A7ZTW7 5.3e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O139:H28 (strain E24377A / ETEC)
O68014 5.35e-07 53 28 2 127 1 benM HTH-type transcriptional regulator BenM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
B7NF72 5.55e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B7LUJ5 5.6e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
B2TU26 6.26e-07 53 31 0 97 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q55459 7.17e-07 53 29 1 122 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P77171 1.41e-06 52 25 3 154 3 ydcI Uncharacterized HTH-type transcriptional regulator YdcI Escherichia coli (strain K12)
P77744 1.42e-06 52 23 2 139 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
P24734 2e-06 52 26 8 250 1 ampR HTH-type transcriptional activator AmpR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P45349 2e-06 52 26 0 125 3 metR HTH-type transcriptional regulator MetR Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P70773 2e-06 52 25 11 286 3 argP HTH-type transcriptional regulator ArgP Aeromonas salmonicida
P07774 2.06e-06 52 28 13 282 1 catM HTH-type transcriptional regulator CatM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P52044 2.19e-06 52 34 1 94 3 ygfI Uncharacterized HTH-type transcriptional regulator YgfI Escherichia coli (strain K12)
O32186 2.45e-06 52 29 1 121 3 yusT Uncharacterized HTH-type transcriptional regulator YusT Bacillus subtilis (strain 168)
O33945 2.81e-06 51 24 6 218 3 None Probable cat1 operon transcriptional activator Acinetobacter lwoffii
Q4G384 2.9e-06 51 27 2 145 3 rbcR Probable RuBisCO transcriptional regulator Emiliania huxleyi
O87883 2.94e-06 50 30 3 162 3 oxyR Probable hydrogen peroxide-inducible genes activator (Fragment) Mycobacterium xenopi
P0A9G1 2.99e-06 51 27 9 285 3 metR HTH-type transcriptional regulator MetR Shigella flexneri
P0A9F9 2.99e-06 51 27 9 285 1 metR HTH-type transcriptional regulator MetR Escherichia coli (strain K12)
P0A9G0 2.99e-06 51 27 9 285 3 metR HTH-type transcriptional regulator MetR Escherichia coli O157:H7
P52595 3.48e-06 51 22 8 288 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
Q05840 4e-06 51 35 1 73 3 clcR HTH-type transcriptional regulator ClcR Pseudomonas putida
Q8KA72 5.02e-06 50 24 9 250 3 metR HTH-type transcriptional regulator MetR Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q46M57 6.93e-06 50 39 0 64 1 tfdR HTH-type transcriptional regulator TdfR Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
Q46M54 7.19e-06 50 39 0 64 1 tfdS HTH-type transcriptional regulator TfdS Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
P52678 7.52e-06 50 28 2 149 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium leprae (strain TN)
P0A2Q4 8.96e-06 50 26 6 253 3 metR HTH-type transcriptional regulator MetR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q5 8.96e-06 50 26 6 253 3 metR HTH-type transcriptional regulator MetR Salmonella typhi
O78432 9.07e-06 50 28 0 119 3 rbcR Probable RuBisCO transcriptional regulator Guillardia theta
P52658 1.15e-05 49 24 8 254 3 ampR HTH-type transcriptional activator AmpR Citrobacter koseri
P52696 1.38e-05 49 22 4 158 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
P03030 1.43e-05 49 28 2 121 3 lysR Transcriptional activator protein LysR Escherichia coli (strain K12)
B1JQ39 1.87e-05 49 38 0 67 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66G51 1.87e-05 49 38 0 67 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TRF4 1.87e-05 49 38 0 67 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis (strain Pestoides F)
Q1CNN4 1.87e-05 49 38 0 67 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8E7 1.87e-05 49 38 0 67 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAA7 1.87e-05 49 38 0 67 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis
B2JZG4 1.87e-05 49 38 0 67 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CBT5 1.87e-05 49 38 0 67 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Antiqua)
A7FD20 1.87e-05 49 38 0 67 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
P0A4T3 1.96e-05 48 23 0 125 1 occR Octopine catabolism/uptake operon regulatory protein OccR Rhizobium radiobacter
P0A4T4 1.96e-05 48 23 0 125 1 occR Octopine catabolism/uptake operon regulatory protein OccR Agrobacterium tumefaciens (strain Ach5)
P77700 2.07e-05 48 30 3 110 1 yahB Uncharacterized HTH-type transcriptional regulator YahB Escherichia coli (strain K12)
A1JI47 2.35e-05 48 38 0 67 3 hdfR HTH-type transcriptional regulator HdfR Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
P52693 2.45e-05 48 26 5 148 3 ntcB Probable nitrogen assimilation transcriptional activator Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P0ACQ4 2.67e-05 48 24 0 121 1 oxyR DNA-binding transcriptional dual regulator OxyR Escherichia coli (strain K12)
P0ACQ5 2.67e-05 48 24 0 121 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACQ6 2.67e-05 48 24 0 121 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O157:H7
Q9HWH8 2.84e-05 48 32 0 70 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P42427 2.85e-05 48 31 0 64 3 tfdT HTH-type transcriptional regulator TfdT Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
P33651 3.27e-05 48 25 2 128 3 blaA HTH-type transcriptional regulator BlaA Streptomyces cacaoi
P52692 3.33e-05 48 35 0 67 3 nhaR Transcriptional activator protein NhaR Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P0A4T7 3.54e-05 48 24 0 97 3 pcaQ HTH-type transcriptional regulator PcaQ Rhizobium radiobacter
P0A4T6 3.54e-05 48 24 0 97 3 pcaQ HTH-type transcriptional regulator PcaQ Agrobacterium fabrum (strain C58 / ATCC 33970)
Q47141 3.85e-05 48 28 5 164 1 hcaR Hca operon transcriptional activator HcaR Escherichia coli (strain K12)
P39376 5.62e-05 47 24 9 262 1 yjiE HTH-type transcriptional regulator YjiE Escherichia coli (strain K12)
P70785 7.27e-05 47 24 4 191 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P20667 7.81e-05 47 40 1 65 3 catR HTH-type transcriptional regulator CatR Pseudomonas putida
P52665 8.95e-05 45 33 0 65 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
P45600 9.18e-05 47 24 10 245 1 cysB HTH-type transcriptional regulator CysB Klebsiella pneumoniae
P71318 0.000109 47 23 0 121 3 oxyR Hydrogen peroxide-inducible genes activator Pectobacterium carotovorum subsp. carotovorum
Q9X725 0.000144 46 23 0 121 3 oxyR Hydrogen peroxide-inducible genes activator Dickeya chrysanthemi
P0A2Q2 0.000151 46 23 1 145 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q3 0.000151 46 23 1 145 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhi
P52662 0.000188 46 26 3 152 3 pecT HTH-type transcriptional regulator PecT Dickeya dadantii (strain 3937)
P72294 0.000192 46 24 1 125 3 occR Octopine catabolism/uptake operon regulatory protein OccR Rhizobium meliloti
Q5N5I5 0.000193 46 26 3 153 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 0.000193 46 26 3 153 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
O52399 0.000195 45 26 10 290 3 argP HTH-type transcriptional regulator ArgP Edwardsiella ictaluri (strain 93-146)
O69772 0.000241 45 24 7 254 3 ampR HTH-type transcriptional activator AmpR Providencia stuartii
P05827 0.000281 45 22 1 145 3 ilvY HTH-type transcriptional regulator IlvY Escherichia coli (strain K12)
P0A9F3 0.000315 45 23 10 250 3 cysB HTH-type transcriptional regulator CysB Escherichia coli (strain K12)
P0A9F4 0.000315 45 23 10 250 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F5 0.000315 45 23 10 250 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O157:H7
O87324 0.000318 45 28 2 149 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium marinum
O34701 0.000369 45 25 3 127 3 yoaU Uncharacterized HTH-type transcriptional regulator YoaU Bacillus subtilis (strain 168)
O33812 0.000398 45 21 1 156 3 None Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) Staphylococcus xylosus
P52670 0.000435 45 28 4 133 3 ilvR HTH-type transcriptional regulator IlvR Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
P44418 0.000607 44 22 0 122 3 oxyR Hydrogen peroxide-inducible genes activator Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P52691 0.000799 44 25 4 154 3 lrrA Probable HTH-type transcriptional regulator LrrA Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_05635
Feature type CDS
Gene lysR
Product DNA-binding transcriptional regulator, LysR family
Location 90532 - 91470 (strand: -1)
Length 939 (nucleotides) / 312 (amino acids)

Contig

Accession ZDB_521
Length 325332 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3316
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Protein Sequence

MDFSLLPVFIAITEQGSLTKAAEYLHMTKSAVSKKLAALETQTGIRLVTRSTRHLQLTEAGQLYYTYLKKAHQAVLDGQDALSHYSREVDGTLKISAPAVFGSLHLAKLIPEFLQRWPSLQAEMVFDDKLTDLVGEGFDLAVRIGELQDSSLIARVLSPCRSVLCASPAYLAQHGTPQNLTDLKSHNCLFYSYFQAGQSWTFLHRGDVVRFTPQGTLRANNSLALHQAVLQGTGICQLPQFIAAPDIRAGRLIPLLPEYLLPRHHIYAVYPDREYLPKKVSAFLHFLQDTLGTEGHYQKEYEQDLSFFKAAE

Flanking regions ( +/- flanking 50bp)

TATAAATGGAAAAACAGAGTTTCCTTTGAGTTGACAATAAAGGAGCTGCGATGGATTTTTCACTTTTACCGGTGTTTATTGCGATCACCGAGCAGGGAAGCCTGACAAAAGCAGCAGAGTATCTGCACATGACCAAATCGGCGGTCAGCAAAAAACTGGCGGCGCTGGAAACACAAACCGGCATCCGGCTGGTCACCCGTTCCACGCGCCATTTACAACTGACTGAAGCCGGACAGCTTTATTACACCTATCTGAAAAAAGCCCATCAGGCGGTGCTGGACGGGCAGGATGCGTTGTCACATTACAGCCGTGAGGTTGACGGCACACTGAAAATCAGTGCGCCGGCGGTGTTCGGCAGTCTGCATCTGGCTAAATTAATACCTGAATTTTTACAGCGCTGGCCGTCATTACAGGCGGAAATGGTATTTGATGACAAACTGACGGATTTGGTCGGGGAAGGGTTTGATCTGGCTGTCAGGATCGGTGAATTACAGGATTCCTCTCTGATTGCCCGCGTGTTATCTCCCTGCCGCAGCGTGTTGTGTGCGTCTCCCGCCTATCTGGCACAACATGGTACACCTCAGAATCTGACTGACCTGAAATCTCATAATTGCCTGTTTTACAGCTATTTTCAGGCCGGTCAGTCATGGACATTTCTGCACCGGGGAGACGTGGTGCGTTTTACCCCGCAGGGCACTCTGCGTGCCAACAACAGTCTGGCGCTGCATCAGGCTGTTTTACAGGGAACGGGGATCTGCCAGCTGCCGCAGTTTATCGCGGCACCGGATATCCGCGCCGGGCGGCTGATCCCGCTGCTGCCGGAATACCTGCTGCCACGGCATCACATCTATGCGGTTTATCCGGATCGTGAATATCTGCCGAAAAAAGTCTCCGCATTTTTACATTTTTTGCAGGATACGCTGGGTACGGAAGGGCACTATCAGAAAGAATATGAACAGGATTTATCCTTTTTTAAGGCAGCGGAATAAAAACCGGATACATTGGGTAAGGCAATCAGCCTGCTGTTTATATCATTTAT