Homologs in group_2826

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10115 FBDBKF_10115 100.0 Morganella morganii S1 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
EHELCC_04915 EHELCC_04915 100.0 Morganella morganii S2 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
LHKJJB_13715 LHKJJB_13715 100.0 Morganella morganii S3 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
HKOGLL_12820 HKOGLL_12820 100.0 Morganella morganii S5 rhaT Permease of the drug/metabolite transporter (DMT) superfamily
F4V73_RS00220 F4V73_RS00220 93.6 Morganella psychrotolerans - EamA family transporter

Distribution of the homologs in the orthogroup group_2826

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2826

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P42194 4.33e-59 193 47 3 267 3 pecM Protein PecM Dickeya dadantii (strain 3937)
Q93V85 6.02e-16 80 29 5 278 1 At3g02690 WAT1-related protein At3g02690, chloroplastic Arabidopsis thaliana
P74436 4.93e-10 62 30 9 302 3 sll0355 Uncharacterized transporter sll0355 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P37511 5.02e-08 56 27 7 218 3 yyaM Uncharacterized transporter YyaM Bacillus subtilis (strain 168)
O32256 3.08e-07 54 26 3 273 3 yvbV Uncharacterized transporter YvbV Bacillus subtilis (strain 168)
O34416 3.56e-07 53 22 4 193 3 yoaV Uncharacterized transporter YoaV Bacillus subtilis (strain 168)
Q44601 1.05e-05 49 22 9 297 3 None Uncharacterized transporter in trpA 3'region Buchnera aphidicola subsp. Schlechtendalia chinensis
O29740 4.84e-05 47 22 6 289 3 AF_0510 Uncharacterized transporter AF_0510 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
O29973 7.46e-05 47 25 8 271 3 AF_0266 Uncharacterized transporter AF_0266 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
O28720 0.000228 45 29 4 168 3 AF_1552 Uncharacterized transporter AF_1552 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
O31493 0.000528 41 36 1 69 5 ydzE Putative permease-like protein YdzE Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_04915
Feature type CDS
Gene rhaT
Product Permease of the drug/metabolite transporter (DMT) superfamily
Location 307116 - 307964 (strand: 1)
Length 849 (nucleotides) / 282 (amino acids)

Contig

Accession ZDB_520
Length 336657 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2826
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00892 EamA-like transporter family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0697 Carbohydrate transport and metabolism (G)
Amino acid transport and metabolism (E)
General function prediction only (R)		 GER Permease of the drug/metabolite transporter (DMT) superfamily

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K15269 probable blue pigment (indigoidine) exporter - -

Protein Sequence

MKRSGVLCLTALAPAVWGSTYLVTTEMLPAGYPMTVAMLRALPAGLLLMLFIRQLPKGIWWGRIFVLGALNFAVFWWLLFVSAYRLPGGVAATVGAIQPLIVLLLSRMVLGNVLKPLAVLGALCGIGGVALLLLTPQAKLDTIGIIAGLAGAFSMAAGTVLSRRWQPDVSPLTFTTWQLTAGGLLLLPVSLLLEPALPPLTLLNISGLLYLGLIGAALTYLFWFRGLAILGPNSVASLGFLSPLTAVLLGWFVLDQQLSLLQCAGVIVVIGSVWLSQVANRC

Flanking regions ( +/- flanking 50bp)

ACTGATGCGGATTATGATGCGTTCCATATCACATTATTAATGAGTAAATTATGAAACGTAGTGGCGTTTTATGTCTGACAGCACTCGCTCCCGCCGTCTGGGGCAGTACCTATCTGGTGACCACCGAAATGCTGCCCGCTGGTTATCCGATGACTGTTGCCATGCTGCGTGCCTTACCCGCCGGTCTGCTGCTGATGCTGTTTATCCGCCAGTTACCTAAAGGGATCTGGTGGGGGCGGATTTTCGTGCTCGGGGCACTGAACTTCGCGGTGTTCTGGTGGCTGCTGTTTGTCTCGGCCTATCGTCTGCCGGGTGGCGTGGCTGCGACCGTCGGCGCTATTCAGCCGCTGATTGTGCTGCTGCTCTCCCGCATGGTGCTGGGCAATGTACTGAAGCCGCTGGCAGTGCTCGGCGCACTGTGCGGGATAGGAGGGGTGGCACTGCTGTTACTGACACCGCAGGCAAAACTCGACACCATCGGTATTATTGCCGGGTTAGCAGGTGCGTTCTCCATGGCCGCCGGTACCGTGCTGAGCCGCCGCTGGCAGCCGGATGTCTCACCGCTGACCTTTACCACCTGGCAGCTCACCGCAGGCGGATTACTGCTGCTGCCGGTCTCTCTGCTGCTTGAACCGGCACTGCCGCCGCTGACGCTGCTCAATATCAGCGGATTATTGTATCTGGGGCTGATTGGCGCGGCGCTGACCTATCTGTTCTGGTTTCGCGGACTGGCAATCCTCGGGCCGAATTCCGTGGCATCGCTCGGTTTTCTCAGTCCGCTGACGGCGGTACTGCTGGGCTGGTTTGTGCTGGATCAGCAACTGAGCCTGTTACAGTGTGCGGGGGTTATCGTGGTGATCGGCAGTGTCTGGCTCAGCCAGGTCGCCAACCGGTGCTGATATAAAAAAACCCGTTACTATGGTGAGTAACGGGTTTTCGTCACGATAAT