Homologs in group_1210

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07030 FBDBKF_07030 100.0 Morganella morganii S1 lysO DUF340 domain-containing protein
EHELCC_03940 EHELCC_03940 100.0 Morganella morganii S2 lysO DUF340 domain-containing protein
LHKJJB_09770 LHKJJB_09770 100.0 Morganella morganii S3 lysO DUF340 domain-containing protein
HKOGLL_09205 HKOGLL_09205 100.0 Morganella morganii S5 lysO DUF340 domain-containing protein
F4V73_RS01220 F4V73_RS01220 91.3 Morganella psychrotolerans - lysine exporter LysO family protein
PMI_RS03365 PMI_RS03365 64.5 Proteus mirabilis HI4320 - lysine exporter LysO family protein

Distribution of the homologs in the orthogroup group_1210

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1210

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75826 8.63e-125 361 62 1 299 2 lysO Lysine exporter LysO Escherichia coli (strain K12)
P44201 2.95e-52 172 44 0 176 3 HI_1452 Putative lysine exporter Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_03940
Feature type CDS
Gene lysO
Product DUF340 domain-containing protein
Location 115446 - 116345 (strand: 1)
Length 900 (nucleotides) / 299 (amino acids)

Contig

Accession ZDB_520
Length 336657 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1210
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03956 Lysine exporter LysO

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2431 Amino acid transport and metabolism (E) E Lysine export protein LysO/YbjE, DUF340 family

Protein Sequence

MYSGLLIILAPLIAGYLIPVSSTALKKIIGRGLSAMVYVILFLMGISLALVENLGANLLVIVQYTLTFSVVVLGCNLAGLFLYGKKYPWQVPAHKQQKPPSRLHMVLESLQLCGVLLVGFATGLFGWSFLAFAGAASEYALIFLLFLVGIQLRNSGMTLRQILINRRGMLVSLIVVVTSLLGGALAALIAGLPVKTGMALSSGFGWYSLSGILLTDAFGPVLGSVGFFNDLAREIAAIMLIPLLINRHRAAALGLGGATTMDFTLPVLQRSGGVSIVPAAIVHGFVLSLFAPVLIALFT

Flanking regions ( +/- flanking 50bp)

ACTGACACGAACATAAGTAAAGACGGCATATTTTTACGGAAACGACACACATGTATTCAGGGTTATTAATTATTCTCGCTCCGCTTATTGCGGGTTATCTCATCCCGGTCAGCAGCACGGCACTGAAAAAAATCATCGGTCGCGGTCTGAGCGCGATGGTGTATGTGATCCTGTTTCTGATGGGGATAAGCCTGGCGCTGGTGGAAAACCTCGGGGCAAATCTGCTGGTGATTGTGCAGTACACCCTGACCTTTTCTGTGGTGGTGCTGGGCTGTAACCTCGCCGGACTGTTTTTATACGGCAAAAAATACCCGTGGCAGGTTCCGGCTCACAAACAGCAAAAACCACCTTCCCGCCTGCATATGGTGCTGGAATCCCTGCAACTGTGTGGTGTGCTGCTGGTCGGCTTTGCCACCGGGTTATTCGGCTGGTCGTTTCTCGCCTTTGCCGGCGCCGCCAGTGAATACGCACTGATTTTCCTGCTGTTCCTTGTCGGAATTCAGCTGCGCAACAGCGGCATGACGCTGCGCCAGATCCTGATCAACCGCCGCGGTATGCTGGTCTCGCTGATTGTGGTGGTTACCTCGCTGCTCGGCGGCGCACTCGCGGCACTGATAGCCGGTCTGCCGGTCAAAACCGGGATGGCGCTCTCCTCCGGCTTCGGCTGGTATTCGCTGTCCGGTATTCTGCTGACCGACGCTTTCGGTCCGGTGCTCGGCAGTGTCGGCTTCTTTAACGACCTGGCGCGGGAGATTGCCGCAATTATGCTGATCCCGCTGCTGATCAACCGCCACCGCGCCGCAGCACTCGGCCTCGGCGGTGCCACCACGATGGACTTTACCCTGCCGGTATTGCAGCGCAGCGGTGGTGTGTCGATTGTCCCGGCCGCGATTGTGCACGGCTTTGTCCTCAGTCTGTTTGCCCCGGTGCTGATAGCCCTGTTTACCTGAAGAGTGAAAACGTATGCCACAACAACGGATTTTAGTGCTGGGTGCCAGCG