Homologs in group_2508

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00935 FBDBKF_00935 100.0 Morganella morganii S1 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
EHELCC_00610 EHELCC_00610 100.0 Morganella morganii S2 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
LHKJJB_04365 LHKJJB_04365 100.0 Morganella morganii S3 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
HKOGLL_02680 HKOGLL_02680 100.0 Morganella morganii S5 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
F4V73_RS06930 F4V73_RS06930 80.4 Morganella psychrotolerans - FecR domain-containing protein

Distribution of the homologs in the orthogroup group_2508

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2508

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23485 0.000127 45 25 3 158 1 fecR Ferric citrate uptake sigma factor regulator FecR Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_02850
Feature type CDS
Gene fecR
Product Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
Location 542250 - 542987 (strand: -1)
Length 738 (nucleotides) / 245 (amino acids)
In genomic island -

Contig

Accession ZDB_519
Length 680340 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2508
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF04773 FecR protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3712 Inorganic ion transport and metabolism (P)
Signal transduction mechanisms (T)		 PT Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07165 transmembrane sensor Two-component system -

Protein Sequence

MKRLFFRQRRRRLLIILLVFLTILAGYGVYNAILMKAKGVEEHYTHRGEIKQYSLRDGSQLKLDTESRAVVAYDNGSRAVELLSGRARFAVSENREEQRPFRVTANGVRVESGNGNFVVDIADNKVSVCPLDETVTTFFNGKTETVGPGQRLEILPEGRAKVFQRQYTDIDWLSGSLVLNNIPLSEAIEMINSYRAVPVVLLNNDKKDIIVDRVLHLSRLDEEVEEMMRSLGLTRESLPGSEAYR

Flanking regions ( +/- flanking 50bp)

TGACGCCGGAAAAACAGATTCCGGCGCTTACAATCCGCAGGAGATTGCAGTTGAAACGCCTATTTTTCAGACAACGGCGACGCCGTTTGCTCATTATATTACTTGTTTTCCTGACGATTCTGGCAGGTTACGGGGTATACAACGCCATTCTGATGAAGGCAAAAGGCGTTGAAGAACATTACACTCACCGCGGAGAGATTAAACAGTATTCTCTCCGTGACGGCAGCCAGCTGAAGCTGGATACCGAATCCCGTGCTGTGGTGGCCTATGATAACGGCAGTCGGGCGGTAGAACTGCTGTCCGGACGGGCGCGTTTTGCCGTCAGCGAAAACCGTGAGGAACAGCGTCCGTTCCGGGTCACCGCCAATGGTGTGCGGGTGGAGTCCGGTAACGGCAACTTTGTGGTGGATATTGCGGATAATAAAGTCTCCGTCTGCCCGCTGGATGAAACCGTAACCACGTTTTTTAACGGTAAAACCGAAACGGTCGGGCCGGGACAGCGTCTGGAAATTCTGCCGGAAGGCCGGGCAAAAGTATTTCAGCGCCAGTACACCGATATCGACTGGTTATCCGGCTCACTGGTGCTGAATAATATCCCGCTGTCAGAAGCGATTGAGATGATCAACAGCTACCGCGCGGTGCCGGTGGTTCTGCTGAATAATGATAAGAAAGACATTATTGTGGATCGTGTGCTGCATCTCAGCCGTCTGGATGAAGAGGTTGAGGAGATGATGCGCTCTCTCGGGCTGACCCGTGAATCGCTGCCGGGCTCAGAGGCTTACCGCTGAGTTGCCTGTCCGGCGATAAAATCTGACTGTCCGGCAACAGCGGCGGTGTC