Homologs in group_3534

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18425 FBDBKF_18425 100.0 Morganella morganii S1 - Single-stranded DNA-binding protein
EHELCC_01960 EHELCC_01960 100.0 Morganella morganii S2 - Single-stranded DNA-binding protein
LHKJJB_00535 LHKJJB_00535 100.0 Morganella morganii S3 - Single-stranded DNA-binding protein
HKOGLL_00575 HKOGLL_00575 100.0 Morganella morganii S5 - Single-stranded DNA-binding protein

Distribution of the homologs in the orthogroup group_3534

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3534

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_01500
Feature type CDS
Gene -
Product Single-stranded DNA-binding protein
Location 306057 - 306368 (strand: -1)
Length 312 (nucleotides) / 103 (amino acids)

Contig

Accession ZDB_519
Length 680340 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3534
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF21628 Major coat protein-like

Protein Sequence

MKMVNLKTSTETYENASGKKETRDEYPYGLRISLENDTIEKLGTAVPDVGESIELHGVAKVLSKSVNEREGKKSVYVELQITDMALGSGSEKTAADVLFDGGE

Flanking regions ( +/- flanking 50bp)

ACCCCCGATTCAAAAGGGGGCGAAAGCCCCTTTTTTATTGGAGACAGACAATGAAAATGGTCAACCTTAAAACCAGCACTGAAACCTACGAGAACGCCAGCGGCAAGAAAGAAACCCGTGATGAATACCCGTATGGCCTGCGCATTTCTCTGGAAAATGACACGATAGAAAAACTCGGCACCGCCGTGCCGGATGTTGGTGAAAGCATTGAGCTGCATGGCGTGGCTAAAGTTCTGTCGAAATCCGTCAATGAGCGCGAAGGAAAGAAGTCTGTTTACGTTGAGCTTCAGATAACAGATATGGCGTTAGGATCCGGTAGCGAAAAAACAGCGGCTGATGTGTTGTTTGACGGAGGTGAATAGTGGCCTCAGAAATCGAAATCTGCAATATCGCGCTCAGCCGCATCGGCAAC