Homologs in group_2493

Help

5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01630 FBDBKF_01630 100.0 Morganella morganii S1 manX PTS mannose transporter subunit IIAB
EHELCC_02100 EHELCC_02100 100.0 Morganella morganii S2 manX PTS mannose transporter subunit IIAB
LHKJJB_00675 LHKJJB_00675 100.0 Morganella morganii S3 manX PTS mannose transporter subunit IIAB
HKOGLL_00715 HKOGLL_00715 100.0 Morganella morganii S5 manX PTS mannose transporter subunit IIAB
F4V73_RS03970 F4V73_RS03970 92.9 Morganella psychrotolerans manX PTS mannose transporter subunit IIAB

Distribution of the homologs in the orthogroup group_2493

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2493

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P69800 6.96e-157 444 72 2 322 3 manX PTS system mannose-specific EIIAB component Shigella flexneri
P69797 6.96e-157 444 72 2 322 1 manX PTS system mannose-specific EIIAB component Escherichia coli (strain K12)
P69798 6.96e-157 444 72 2 322 3 manX PTS system mannose-specific EIIAB component Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P69799 6.96e-157 444 72 2 322 3 manX PTS system mannose-specific EIIAB component Escherichia coli O157:H7
Q5XAF5 1.48e-81 253 40 4 327 1 manX PTS system mannose-specific EIIAB component Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
Q9RGG4 5.76e-54 177 54 0 148 1 sorB PTS system sorbose-specific EIIB component Lacticaseibacillus casei
P37081 1.78e-50 168 50 0 159 1 sorB PTS system sorbose-specific EIIB component Klebsiella pneumoniae
P26380 3.63e-47 159 48 0 149 1 levE PTS system fructose-specific EIIB component Bacillus subtilis (strain 168)
P42904 3.97e-25 102 35 2 157 4 agaV N-acetylgalactosamine-specific phosphotransferase enzyme IIB component 2 Escherichia coli (strain K12)
P42909 2.4e-16 78 32 3 161 4 agaB N-acetylgalactosamine-specific phosphotransferase enzyme IIB component 1 Escherichia coli (strain K12)
Q5XCC7 3.86e-13 69 30 0 101 1 M6_Spy0801 Probable phosphotransferase enzyme IIB component M6_Spy0801 Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
P26379 6.53e-13 68 33 1 108 1 levD PTS system fructose-specific EIIA component Bacillus subtilis (strain 168)
Q9RGG5 7.23e-06 48 27 4 128 1 sorA PTS system sorbose-specific EIIA component Lacticaseibacillus casei
P37080 7.32e-06 48 33 3 102 1 sorF PTS system sorbose-specific EIIA component Klebsiella pneumoniae
P36881 7.72e-05 45 23 2 139 3 yadI Putative phosphotransferase enzyme IIA component YadI Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_01360
Feature type CDS
Gene manX
Product PTS mannose transporter subunit IIAB
Location 272302 - 273270 (strand: 1)
Length 969 (nucleotides) / 322 (amino acids)

Contig

Accession ZDB_519
Length 680340 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2493
Orthogroup size 6
N. genomes 6

Actions

Genomic region

Domains

PF03610 PTS system fructose IIA component
PF03830 PTS system sorbose subfamily IIB component

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3444 Carbohydrate transport and metabolism (G) G Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIB

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02794 mannose PTS system EIIAB component [EC:2.7.1.191] Fructose and mannose metabolism
Amino sugar and nucleotide sugar metabolism
Metabolic pathways
Phosphotransferase system (PTS)		 -

Protein Sequence

MIGTHGKAAEQLLRTTEMLIGEQENVSFIDFVPGENADTLYAKYNEKLPGLSTADGVLFLVDTWGGSPFNAANRIVTEQDQTAGGNSNYEIVTGVNVPMLVETFMCRDDNPSLQELVAVALETGREGIRALKAQDEPAPKAAPAPKPAAQPAAPAGPGGHMTIALARIDDRLIHGQVATRWTKETNVKRIIVVSDEVAKDTVRSTLLKQVAPPGVTAHVVDVAKMVRVWNNPKYANDRCMLLFTNPADVLRLVEDGVEIKSVNIGGMAFHEGKKQVNNAVSIDENDIVAFKALNDRNIELEVRKVSTDSKIKMMDLISKAES

Flanking regions ( +/- flanking 50bp)

AGAACCATCCTGACTGATGTTAAGGGGGAACAGAGGTGAGTATAGCCATTATGATTGGCACCCACGGCAAAGCCGCTGAGCAGTTACTGCGCACGACGGAAATGCTGATCGGTGAACAGGAGAACGTCTCCTTCATCGATTTCGTACCGGGGGAAAATGCCGACACACTATATGCGAAGTACAATGAGAAGCTGCCCGGTTTATCAACCGCTGACGGGGTATTATTCCTCGTTGATACCTGGGGCGGCAGCCCGTTCAACGCAGCAAACCGTATTGTGACTGAGCAGGATCAGACCGCAGGCGGCAACAGCAATTATGAGATAGTCACAGGCGTTAACGTGCCGATGCTGGTCGAGACCTTTATGTGCCGTGATGATAATCCGTCATTGCAGGAACTGGTTGCGGTGGCGCTGGAAACCGGCCGTGAAGGGATCCGCGCCCTGAAAGCACAGGACGAACCAGCTCCGAAAGCGGCACCTGCACCAAAACCGGCCGCACAGCCGGCGGCACCGGCAGGCCCGGGCGGACACATGACTATCGCTCTCGCCCGTATCGATGACCGTCTGATCCACGGCCAGGTCGCCACCCGCTGGACCAAAGAAACCAACGTCAAACGCATTATTGTCGTCAGTGACGAGGTTGCCAAAGACACCGTCCGCTCAACACTGCTCAAGCAGGTTGCTCCTCCGGGTGTAACCGCGCACGTGGTGGATGTGGCGAAAATGGTGCGTGTCTGGAATAACCCGAAATACGCCAATGACCGCTGCATGCTCCTGTTTACCAACCCGGCAGATGTTCTGCGCCTGGTGGAAGACGGTGTGGAGATTAAATCAGTCAACATCGGCGGGATGGCCTTCCACGAAGGTAAAAAACAGGTTAACAATGCGGTTTCTATCGATGAAAACGATATCGTGGCATTCAAAGCGCTGAATGACCGCAACATCGAGCTGGAAGTCCGCAAAGTCTCCACCGATTCAAAAATAAAAATGATGGATTTAATCAGCAAAGCTGAAAGTTAATTTGACCCATTACTCAATACAAAATTTGTTGTCTGCAAAATGACTGGTTA