Homologs in group_3216

Help

4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02815 FBDBKF_02815 100.0 Morganella morganii S1 lysR LysR family transcriptional regulator
EHELCC_03285 EHELCC_03285 100.0 Morganella morganii S2 lysR LysR family transcriptional regulator
LHKJJB_01860 LHKJJB_01860 100.0 Morganella morganii S3 lysR LysR family transcriptional regulator
HKOGLL_01900 HKOGLL_01900 100.0 Morganella morganii S5 lysR LysR family transcriptional regulator

Distribution of the homologs in the orthogroup group_3216

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3216

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P30864 3.19e-12 68 42 0 83 3 yafC Uncharacterized HTH-type transcriptional regulator YafC Escherichia coli (strain K12)
P96194 2.98e-11 62 38 1 97 3 None Uncharacterized HTH-type transcriptional regulator in ibpB-leuC intergenic region Azotobacter vinelandii
P55576 1.35e-10 63 39 0 93 3 NGR_a02420 Uncharacterized HTH-type transcriptional regulator y4mQ Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q9X5P2 1.84e-10 63 36 0 94 2 oxyR Probable hydrogen peroxide-inducible genes activator Streptomyces viridosporus
P75836 1.95e-10 63 26 7 268 3 ycaN Uncharacterized HTH-type transcriptional regulator YcaN Escherichia coli (strain K12)
P43011 7.67e-10 61 36 0 96 3 HI_1364 Uncharacterized HTH-type transcriptional regulator HI_1364 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P27111 9.73e-10 60 48 1 70 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
P37641 9.92e-10 60 33 0 92 3 yhjC Uncharacterized HTH-type transcriptional regulator YhjC Escherichia coli (strain K12)
Q8X4M5 1.03e-09 60 48 1 70 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
A0A0H2ZDG9 1.39e-09 60 36 0 92 3 PA14_22550 HTH-type transcriptional repressor PA14_22550 Pseudomonas aeruginosa (strain UCBPP-PA14)
P46068 1.59e-09 60 38 1 89 2 dsdC HTH-type transcriptional regulator DsdC Escherichia coli (strain K12)
A5F9F9 2.15e-09 60 33 3 128 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P0C6D1 2.32e-09 60 33 3 128 3 irgB Iron-regulated virulence regulatory protein IrgB Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P45099 2.65e-09 59 37 0 80 3 gcvA Glycine cleavage system transcriptional activator homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9JXW7 1.23e-08 57 36 1 84 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9JPU9 1.26e-08 57 36 1 84 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup C (strain 8013)
P20668 1.33e-08 57 35 0 76 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
P52696 2.76e-08 57 43 0 64 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
Q47141 3e-08 56 40 2 88 1 hcaR Hca operon transcriptional activator HcaR Escherichia coli (strain K12)
A7Z5E4 3.61e-08 56 41 0 79 3 yofA HTH-type transcriptional regulator YofA Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
P76250 3.9e-08 56 30 0 95 1 dmlR HTH-type transcriptional regulator DmlR Escherichia coli (strain K12)
P76250 6.96e-06 49 29 3 110 1 dmlR HTH-type transcriptional regulator DmlR Escherichia coli (strain K12)
O06703 4.13e-08 56 36 0 86 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
P0A9F6 4.89e-08 56 39 0 76 1 gcvA Glycine cleavage system transcriptional activator Escherichia coli (strain K12)
P0A9F7 4.89e-08 56 39 0 76 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F8 4.89e-08 56 39 0 76 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O157:H7
Q01610 5.06e-08 56 40 2 89 3 PA2220 Putative transcriptional regulator Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P42722 8.98e-08 55 40 1 72 3 cfxR HTH-type transcriptional regulator CfxR Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P42507 1.13e-07 55 31 1 97 3 hvrB AhcY transcriptional activator HvrB Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
Q04778 1.2e-07 55 37 1 85 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
P77309 1.3e-07 54 41 0 75 3 yneJ Uncharacterized HTH-type transcriptional regulator YneJ Escherichia coli (strain K12)
P77744 1.58e-07 54 29 3 144 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
P52683 1.6e-07 54 31 1 112 3 smeR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Serratia marcescens
P52678 1.68e-07 54 38 0 71 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium leprae (strain TN)
P52689 1.86e-07 54 35 0 84 3 ltrA Probable HTH-type transcriptional regulator LtrA Klebsiella pneumoniae
P52689 0.000178 45 30 0 106 3 ltrA Probable HTH-type transcriptional regulator LtrA Klebsiella pneumoniae
P52677 2.33e-07 54 40 0 64 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium avium
Q765S2 2.52e-07 53 34 1 102 3 allS HTH-type transcriptional activator AllS Klebsiella pneumoniae
P0ACR0 2.6e-07 53 39 0 76 1 allS HTH-type transcriptional activator AllS Escherichia coli (strain K12)
P0ACR1 2.6e-07 53 39 0 76 3 allS HTH-type transcriptional activator AllS Escherichia coli O157:H7
O87883 3e-07 52 36 0 71 3 oxyR Probable hydrogen peroxide-inducible genes activator (Fragment) Mycobacterium xenopi
Q1RF30 3.13e-07 53 38 2 104 3 allS HTH-type transcriptional activator AllS Escherichia coli (strain UTI89 / UPEC)
A1A8H0 3.13e-07 53 38 2 104 3 allS HTH-type transcriptional activator AllS Escherichia coli O1:K1 / APEC
Q8FK66 3.57e-07 53 34 1 102 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TKD7 3.57e-07 53 34 1 102 3 allS HTH-type transcriptional activator AllS Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P12529 3.99e-07 53 36 0 85 1 ampR HTH-type transcriptional activator AmpR Citrobacter freundii
O34685 4.35e-07 53 39 0 74 1 yofA HTH-type transcriptional regulator YofA Bacillus subtilis (strain 168)
O68014 5.16e-07 53 38 0 65 1 benM HTH-type transcriptional regulator BenM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
A1JI47 6.67e-07 52 37 1 87 3 hdfR HTH-type transcriptional regulator HdfR Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
P94403 6.91e-07 52 32 2 97 3 bsdA HTH-type transcriptional regulator BsdA Bacillus subtilis (strain 168)
P77700 8.23e-07 52 39 0 69 1 yahB Uncharacterized HTH-type transcriptional regulator YahB Escherichia coli (strain K12)
P67662 8.44e-07 52 23 6 264 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli (strain K12)
P67663 8.44e-07 52 23 6 264 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P67664 8.44e-07 52 23 6 264 3 aaeR HTH-type transcriptional activator AaeR Escherichia coli O157:H7
Q46M54 9.32e-07 52 44 0 63 1 tfdS HTH-type transcriptional regulator TfdS Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
Q46M57 9.32e-07 52 43 0 64 1 tfdR HTH-type transcriptional regulator TdfR Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
O32186 1.14e-06 52 39 0 76 3 yusT Uncharacterized HTH-type transcriptional regulator YusT Bacillus subtilis (strain 168)
Q0TD46 1.22e-06 52 32 4 123 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q0TD46 0.00022 45 31 0 86 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P39592 1.25e-06 52 26 1 129 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
Q1R6S1 1.4e-06 51 32 4 123 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain UTI89 / UPEC)
Q1R6S1 0.000239 45 31 0 86 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain UTI89 / UPEC)
Q8FDH0 1.4e-06 51 32 4 123 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q8FDH0 0.000239 45 31 0 86 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P39127 1.44e-06 51 31 1 98 3 citR HTH-type transcriptional regulator CitR Bacillus subtilis (strain 168)
P52670 2.12e-06 51 40 0 72 3 ilvR HTH-type transcriptional regulator IlvR Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
P94387 2.42e-06 51 33 2 106 3 ycgK Uncharacterized HTH-type transcriptional regulator YcgK Bacillus subtilis (strain 168)
P0ACQ9 2.52e-06 51 37 0 78 3 tdcA HTH-type transcriptional regulator TdcA Shigella flexneri
P0ACQ7 2.52e-06 51 37 0 78 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli (strain K12)
P0ACQ8 2.52e-06 51 37 0 78 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli O157:H7
Q1XDT2 2.59e-06 50 47 0 55 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
P25544 2.76e-06 50 31 1 90 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
Q55459 3.35e-06 50 31 0 88 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
B7LUJ5 3.38e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
Q9HWH8 3.45e-06 50 38 0 80 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q1R4H3 3.51e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain UTI89 / UPEC)
P59369 3.51e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TAV4 3.51e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O6:K15:H31 (strain 536 / UPEC)
B7N260 3.51e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O81 (strain ED1a)
B7MGH6 3.51e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O45:K1 (strain S88 / ExPEC)
B1JQ39 3.54e-06 50 37 1 87 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66G51 3.54e-06 50 37 1 87 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TRF4 3.54e-06 50 37 1 87 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis (strain Pestoides F)
Q1CNN4 3.54e-06 50 37 1 87 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8E7 3.54e-06 50 37 1 87 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAA7 3.54e-06 50 37 1 87 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis
B2JZG4 3.54e-06 50 37 1 87 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CBT5 3.54e-06 50 37 1 87 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Antiqua)
A7FD20 3.54e-06 50 37 1 87 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
Q329U3 3.64e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Shigella dysenteriae serotype 1 (strain Sd197)
B6I4A0 3.64e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SE11)
B7M5B2 3.64e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O8 (strain IAI1)
B5YY14 3.64e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7 (strain EC4115 / EHEC)
Q8XAW1 3.64e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O157:H7
B7L8A6 3.64e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain 55989 / EAEC)
A7ZTW7 3.64e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O139:H28 (strain E24377A / ETEC)
Q3YVK2 3.85e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Shigella sonnei (strain Ss046)
P0A8S0 3.85e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri
Q0SYV7 3.85e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Shigella flexneri serotype 5b (strain 8401)
Q31UM0 3.85e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 4 (strain Sb227)
B1LLU0 3.85e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain SMS-3-5 / SECEC)
P0A8R9 3.85e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12)
B1IWY2 3.85e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
A8A6M0 3.85e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O9:H4 (strain HS)
B1X9Y2 3.85e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / DH10B)
C4ZZ35 3.85e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli (strain K12 / MC4100 / BW2952)
B7UMM1 3.85e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O127:H6 (strain E2348/69 / EPEC)
P45463 3.99e-06 50 31 4 123 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain K12)
P45463 0.000208 45 31 0 86 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli (strain K12)
B7NU32 4e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O7:K1 (strain IAI39 / ExPEC)
Q8XBK9 4.1e-06 50 31 4 123 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O157:H7
Q8XBK9 0.000214 45 31 0 86 3 ttdR HTH-type transcriptional activator TtdR Escherichia coli O157:H7
B7NF72 4.11e-06 50 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
P52693 4.79e-06 50 31 3 113 3 ntcB Probable nitrogen assimilation transcriptional activator Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P33651 5.3e-06 50 34 0 81 3 blaA HTH-type transcriptional regulator BlaA Streptomyces cacaoi
Q57748 5.96e-06 49 36 0 71 3 MJ0300 Uncharacterized HTH-type transcriptional regulator MJ0300 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P96725 6.12e-06 49 32 0 74 3 ywqM Uncharacterized HTH-type transcriptional regulator YwqM Bacillus subtilis (strain 168)
P24734 6.13e-06 49 42 0 63 1 ampR HTH-type transcriptional activator AmpR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q57083 7.75e-06 49 46 0 60 1 perR HTH-type transcriptional regulator PerR Escherichia coli (strain K12)
P51205 7.85e-06 49 45 0 55 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
B2TU26 8.19e-06 49 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
B4TNR5 9.47e-06 49 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Salmonella schwarzengrund (strain CVM19633)
B5FN59 1.02e-05 48 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Salmonella dublin (strain CT_02021853)
O87324 1.04e-05 49 37 0 64 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium marinum
P0A2Q0 1.06e-05 48 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q1 1.06e-05 48 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Salmonella typhi
B5BIR0 1.06e-05 48 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain AKU_12601)
C0Q2U0 1.06e-05 48 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi C (strain RKS4594)
A9MXD5 1.06e-05 48 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q5PJZ0 1.06e-05 48 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TAZ8 1.06e-05 48 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Salmonella heidelberg (strain SL476)
B5EZ22 1.06e-05 48 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Salmonella agona (strain SL483)
P52676 1.08e-05 48 30 1 106 3 nmcR Carbapenem-hydrolyzing beta-lactamase transcriptional activator Enterobacter cloacae
B4SYF7 1.09e-05 48 37 0 78 3 hdfR HTH-type transcriptional regulator HdfR Salmonella newport (strain SL254)
P77333 1.18e-05 48 32 0 93 1 pgrR HTH-type transcriptional regulator PgrR Escherichia coli (strain K12)
P77171 1.21e-05 48 32 1 88 3 ydcI Uncharacterized HTH-type transcriptional regulator YdcI Escherichia coli (strain K12)
P05051 1.24e-05 48 42 0 63 3 ampR HTH-type transcriptional activator AmpR Enterobacter cloacae
P0ACR8 1.27e-05 48 35 0 62 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Shigella flexneri
P0ACR7 1.27e-05 48 35 0 62 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Escherichia coli (strain K12)
P52595 1.47e-05 48 39 0 71 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
Q6B936 1.51e-05 48 28 6 188 3 rbcR Probable RuBisCO transcriptional regulator Gracilaria tenuistipitata var. liui
P0A4T7 1.74e-05 48 33 0 83 3 pcaQ HTH-type transcriptional regulator PcaQ Rhizobium radiobacter
P0A4T6 1.74e-05 48 33 0 83 3 pcaQ HTH-type transcriptional regulator PcaQ Agrobacterium fabrum (strain C58 / ATCC 33970)
Q5N5I5 1.74e-05 48 36 0 65 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 1.74e-05 48 36 0 65 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P52665 2.73e-05 46 39 0 66 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
P52044 3.17e-05 47 32 0 74 3 ygfI Uncharacterized HTH-type transcriptional regulator YgfI Escherichia coli (strain K12)
P67668 3.24e-05 47 38 3 90 3 BQ2027_MB2303C Uncharacterized HTH-type transcriptional regulator Mb2303c Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WMF3 3.24e-05 47 38 3 90 1 Rv2282c Uncharacterized HTH-type transcriptional regulator Rv2282c Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMF2 3.24e-05 47 38 3 90 3 MT2340 Uncharacterized HTH-type transcriptional regulator MT2340 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P44821 3.41e-05 47 26 0 91 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A2CI69 3.52e-05 47 27 6 187 3 rbcR Probable RuBisCO transcriptional regulator Chlorokybus atmophyticus
Q05840 3.53e-05 47 39 0 63 3 clcR HTH-type transcriptional regulator ClcR Pseudomonas putida
P72131 3.68e-05 47 40 0 91 1 ptxR HTH-type transcriptional regulator PtxR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P77559 3.8e-05 47 35 0 70 3 ynfL Uncharacterized HTH-type transcriptional regulator YnfL Escherichia coli (strain K12)
P0ACR2 4.32e-05 47 38 1 76 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli (strain K12)
P0ACR3 4.32e-05 47 38 1 76 3 ydhB Uncharacterized HTH-type transcriptional regulator YdhB Escherichia coli O157:H7
P71025 6.86e-05 46 35 0 71 3 czcR HTH-type transcriptional regulator CzcR Bacillus subtilis (strain 168)
Q3MCB5 9.32e-05 46 43 1 65 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)
Q8YQ82 0.000102 46 43 1 65 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
A4QH19 0.000105 46 30 0 86 1 shiR HTH-type transcriptional regulator ShiR Corynebacterium glutamicum (strain R)
O33945 0.000121 45 36 1 71 3 None Probable cat1 operon transcriptional activator Acinetobacter lwoffii
P52686 0.000126 45 40 0 57 3 sdsB SDS degradation transcriptional activation protein Pseudomonas sp. (strain ATCC 19151)
P94501 0.000127 45 37 1 80 1 gltR HTH-type transcriptional regulator GltR Bacillus subtilis (strain 168)
P49518 0.000141 45 36 0 68 3 rbcR Probable RuBisCO transcriptional regulator Trieres chinensis
P52666 0.000146 45 37 0 66 3 budR HTH-type transcriptional regulator BudR Raoultella terrigena
P67660 0.000153 45 30 2 110 1 yhaJ Probable HTH-type transcriptional regulator YhaJ Escherichia coli (strain K12)
P67661 0.000153 45 30 2 110 1 yhaJ HTH-type transcriptional regulator YhaJ Escherichia coli O157:H7
P37499 0.000164 45 36 0 74 3 yybE Uncharacterized HTH-type transcriptional regulator YybE Bacillus subtilis (strain 168)
P45461 0.000191 45 35 1 82 3 ampR HTH-type transcriptional activator AmpR Yersinia enterocolitica
P0ACQ4 0.000191 45 31 0 83 1 oxyR DNA-binding transcriptional dual regulator OxyR Escherichia coli (strain K12)
P0ACQ5 0.000191 45 31 0 83 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACQ6 0.000191 45 31 0 83 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O157:H7
P74422 0.000195 45 36 2 88 3 ntcB Probable nitrogen assimilation transcriptional activator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P71318 0.000197 45 31 0 83 3 oxyR Hydrogen peroxide-inducible genes activator Pectobacterium carotovorum subsp. carotovorum
Q06610 0.000228 45 37 0 78 3 rbcR RuBisCO operon transcriptional regulator Acidithiobacillus ferrooxidans
P42427 0.00027 44 40 1 66 3 tfdT HTH-type transcriptional regulator TfdT Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
A0R8S0 0.000271 45 31 1 95 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis (strain Al Hakam)
P39647 0.000287 44 27 0 80 1 cysL HTH-type transcriptional regulator CysL Bacillus subtilis (strain 168)
Q81IX0 0.000302 44 34 0 79 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q6HPH4 0.000311 44 34 0 79 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis subsp. konkukian (strain 97-27)
P73123 0.000337 44 40 1 65 3 rbcR Probable RuBisCO transcriptional regulator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q81VJ1 0.00037 44 34 0 79 3 czcR HTH-type transcriptional regulator CzcR Bacillus anthracis
Q63H01 0.000377 44 34 0 79 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ZK / E33L)
Q73EY2 0.000377 44 34 0 79 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 10987 / NRS 248)
A0T0V5 0.000609 43 35 1 79 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
P07774 0.00068 43 39 0 53 1 catM HTH-type transcriptional regulator CatM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
P37459 0.000731 43 26 0 94 3 sinR Probable HTH-type transcriptional regulator SinR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P52660 0.000738 43 39 0 56 3 blaA HTH-type transcriptional regulator BlaA Proteus vulgaris
Q85G62 0.000738 43 40 1 65 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)
O34827 0.000747 43 33 0 57 3 ykuM Uncharacterized HTH-type transcriptional regulator YkuM Bacillus subtilis (strain 168)
P25547 0.000807 43 32 2 91 3 gbpR HTH-type transcriptional regulator GbpR Rhizobium radiobacter
O78432 0.000869 43 38 1 63 3 rbcR Probable RuBisCO transcriptional regulator Guillardia theta
P52659 0.001 43 35 2 103 3 abaB HTH-type transcriptional regulator AbaB Streptomyces antibioticus
P11720 0.001 43 35 0 67 1 trpI HTH-type transcriptional regulator TrpI Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)

  • Number of RefSeq hits:

General

Source Morganella morganii S4
Locus tag NLDBIP_00175
Feature type CDS
Gene lysR
Product LysR family transcriptional regulator
Location 32490 - 33221 (strand: -1)
Length 732 (nucleotides) / 243 (amino acids)

Contig

Accession ZDB_519
Length 680340 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3216
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Protein Sequence

MIFITENDYDEIINHHCDKSLMQKTDSFSGITAFVAAAQHGSFTAAADKLGITKSAAGKRISQLEAALGVSLFQRGNRRITLTPAGEKYLARCLSALAILGEAEDEISEQQTTLSGRQLTTQTSVLCAAPGYLTRAGTPADTGELMQHRCITGFRRDKPFYWSLYCDGQLLRIIPPPFYELADGDAMLAAVLGGHGIAQLPLWMIGDYLADGSLCRVLPVTAHRPRYIFSGRRRRSYRSEPVA

Flanking regions ( +/- flanking 50bp)

GCGGGTATTCAACGTTATTATCCTTTTTATGTGTTAACAGAGCAGAGCTGATGATTTTTATCACAGAAAACGATTATGATGAAATCATTAACCATCACTGTGATAAATCGCTCATGCAGAAAACGGATTCTTTTTCCGGGATTACCGCCTTTGTCGCCGCTGCACAGCACGGCAGTTTTACTGCGGCAGCAGATAAACTGGGGATCACCAAATCAGCGGCCGGTAAACGGATAAGTCAGTTGGAGGCTGCTCTGGGTGTCAGCTTGTTTCAGCGCGGCAACCGGCGTATTACCCTGACCCCTGCCGGGGAAAAATATCTCGCCCGCTGCCTCTCTGCCCTTGCCATTCTCGGTGAGGCGGAAGATGAAATCAGTGAGCAGCAAACCACCCTGAGCGGCCGGCAGCTGACCACCCAGACGTCGGTGTTGTGTGCCGCTCCCGGTTATCTGACGCGGGCCGGTACCCCGGCGGATACCGGTGAACTGATGCAGCACCGCTGTATTACCGGATTCCGGCGCGATAAGCCGTTTTACTGGTCTTTGTATTGTGATGGTCAGCTTTTACGCATTATCCCGCCGCCGTTTTATGAGCTGGCGGATGGTGATGCCATGCTGGCGGCGGTGCTGGGCGGGCATGGCATTGCCCAGTTGCCGCTGTGGATGATCGGTGATTATCTGGCTGACGGCTCTCTGTGCCGGGTACTGCCTGTGACGGCACACAGACCCCGGTACATATTCTCCGGCCGCAGACGGCGCAGTTACCGGTCAGAACCCGTTGCGTGACAGACGCTCTGCTGGCCGCAACACAACAGGGGGGCGTTCGATTAACCGGC