Homologs in group_3668

Help

3 homologs were identified in 3 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_20155 FBDBKF_20155 100.0 Morganella morganii S1 tnp IS30-like element ISAba125 family transposase
NLDBIP_19590 NLDBIP_19590 100.0 Morganella morganii S4 tnp IS30-like element ISAba125 family transposase
HKOGLL_19470 HKOGLL_19470 100.0 Morganella morganii S5 tnp IS30-like element ISAba125 family transposase

Distribution of the homologs in the orthogroup group_3668

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3668

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37248 1.07e-92 282 44 6 327 3 IS1086 Transposase for insertion sequence element IS1086 Cupriavidus metallidurans (strain ATCC 43123 / DSM 2839 / NBRC 102507 / CH34)
P0CF88 1.8e-58 196 38 8 334 3 insI1 Transposase InsI for insertion sequence element IS30A Escherichia coli (strain K12)
P0CF90 3.52e-58 195 38 8 334 3 insI4 Transposase InsI for insertion sequence element IS30D Escherichia coli (strain K12)
P0CF89 3.52e-58 195 38 8 334 3 insI3 Transposase InsI for insertion sequence element IS30C Escherichia coli (strain K12)
P37247 1.97e-40 147 33 8 334 3 None Transposase for insertion sequence element IS4351 Bacteroides fragilis
P37245 2.54e-30 120 29 9 329 3 None Probable transposase for insertion-like sequence element IS1161 Streptococcus salivarius
P15894 3.32e-27 112 30 11 336 3 ORF3 Putative integrase ORF3 Spiroplasma virus SpV1-R8A2 B

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_19555
Feature type CDS
Gene tnp
Product IS30-like element ISAba125 family transposase
Location 3448 - 4458 (strand: 1)
Length 1011 (nucleotides) / 336 (amino acids)

Contig

Accession ZDB_394
Length 7614 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3668
Orthogroup size 4
N. genomes 4

Actions

Genomic region

Domains

PF00665 Integrase core domain
PF13936 Helix-turn-helix domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2826 Mobilome: prophages, transposons (X) X Transposase and inactivated derivatives, IS30 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07482 transposase, IS30 family - -

Protein Sequence

MSYHHLNFEDRTALMLESRKEGFSARKFAELIKRHPSTIYRELKRNSINDVYQARYASDNTFARRRRGHRKLKIDSILWKFIVEAIRCLWSPQQIAKRLKTFPDLDQTMNVSHTTIYSTIRALPKGELKKDLLSCLRHENKKRKANGEPKKDSILQDIKTIHERPAEVQERKIPGHWEADLIKGKDNKSSIATLIERNTRLCILATLPDAKAESVRKALTEALKYLPAELRKTLTYDRGREMSEHKILEEDLGIDVYFCDPHSPWQKGTCENMNGLIRQYLPKGIDLNQADQHYLNQVAMSLNTRPRKALDWLTPLEKFAQLVDYHMAFETVAPHV

Flanking regions ( +/- flanking 50bp)

TGCGACATAAACCACCTAATTAATTTAAAGGGTTTATGGAGTATATAAAATTGTCATACCATCATCTTAACTTTGAAGATCGTACTGCATTAATGCTTGAGTCAAGAAAAGAAGGCTTTTCAGCCAGAAAATTTGCTGAACTCATTAAAAGACATCCTAGTACGATCTATCGTGAGCTTAAAAGAAATAGCATCAATGACGTTTATCAAGCTCGATATGCTTCTGATAACACCTTCGCTAGACGTAGACGTGGTCACAGAAAACTCAAAATCGATTCAATCCTCTGGAAATTTATTGTTGAAGCGATCCGTTGTTTATGGTCTCCTCAGCAAATAGCAAAGCGTTTAAAGACATTTCCTGATTTGGATCAAACAATGAATGTAAGCCATACAACGATTTATTCAACGATACGAGCATTACCAAAGGGTGAGTTGAAAAAAGACTTATTATCCTGTCTACGTCATGAAAATAAAAAGCGAAAAGCTAACGGTGAACCTAAAAAAGATTCTATATTACAGGATATTAAAACTATTCATGAGCGCCCAGCCGAAGTTCAAGAAAGAAAAATACCGGGTCATTGGGAAGCTGATTTAATTAAAGGTAAAGACAATAAAAGTTCGATAGCAACACTTATTGAACGAAATACACGGCTCTGTATCTTGGCAACATTACCTGATGCAAAGGCAGAATCAGTGCGCAAGGCTTTAACTGAAGCTCTGAAATATTTACCTGCAGAACTGCGTAAAACGTTGACCTATGACCGTGGACGTGAGATGTCAGAACATAAAATACTCGAAGAAGATTTAGGCATAGATGTATATTTCTGTGACCCACATTCACCCTGGCAAAAAGGCACATGCGAAAATATGAATGGTTTAATTAGGCAATATTTACCTAAAGGGATTGATTTAAATCAGGCAGATCAGCATTATTTAAATCAAGTTGCCATGTCACTGAATACTCGTCCTAGAAAGGCGTTAGATTGGCTTACACCATTAGAGAAATTTGCTCAGCTTGTTGATTATCATATGGCTTTTGAAACTGTCGCACCTCATGTTTGAATTCGCCCCATATTTTTGCTACAGTGAACCAAATTAAGATCATCTATTTA