Homologs in group_3617

Help

4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_20290 FBDBKF_20290 100.0 Morganella morganii S1 tnsA Heteromeric transposase endonuclease subunit TnsA
EHELCC_19080 EHELCC_19080 100.0 Morganella morganii S2 tnsA Heteromeric transposase endonuclease subunit TnsA
NLDBIP_19555 NLDBIP_19555 100.0 Morganella morganii S4 tnsA Heteromeric transposase endonuclease subunit TnsA
HKOGLL_19435 HKOGLL_19435 100.0 Morganella morganii S5 tnsA Heteromeric transposase endonuclease subunit TnsA

Distribution of the homologs in the orthogroup group_3617

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3617

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P13988 4.72e-67 213 42 2 260 1 tnsA Transposon Tn7 transposition protein TnsA Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_19510
Feature type CDS
Gene tnsA
Product Heteromeric transposase endonuclease subunit TnsA
Location 4785 - 5630 (strand: 1)
Length 846 (nucleotides) / 281 (amino acids)
In genomic island -

Contig

Accession ZDB_393
Length 10442 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3617
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Domains

PF08721 TnsA endonuclease C terminal
PF08722 TnsA-like endonuclease N terminal

Protein Sequence

MDAGFFMSGTFKGLTQAQIDRRLKEGRGQGQGRDYKPFIYTRDVSSLGRSHRLPGSKTRRLHHLLSDLELAIFLTLDRSPQVTDIREQFPMRAEDTVRIAEELGLAHGRYKGIPQVLTSDFLVDFDDPQRPSVAIQAKYSADLQKPEVIERLELERRYWQEKGIPWFIITEREVSREAFANIQWLYPAHAEDDIAQDDLAHYQQLFLLEFQRHPDRKLTAIAQEMDTSGQLEAGQALYWLRQLLARHWFLFDLDTPYRVLKPKDLAANPHQIHQELISVVR

Flanking regions ( +/- flanking 50bp)

ATAAAGTTTCATCCTAAGCCTGTATCCGCTATGTTGAGGTCATCGACACGGTGGATGCAGGCTTTTTCATGTCTGGAACATTCAAGGGCCTGACCCAGGCACAGATTGATAGAAGGCTCAAGGAGGGGCGTGGCCAAGGCCAGGGACGGGACTACAAGCCGTTCATCTACACCAGGGATGTGTCCTCGTTGGGGCGCTCCCACCGCCTGCCTGGCAGCAAGACCCGGCGTCTGCACCATCTTTTATCCGATCTTGAACTGGCCATTTTCCTGACCTTGGATCGGTCTCCCCAGGTCACTGATATCCGTGAGCAGTTCCCGATGCGGGCCGAAGATACGGTGCGCATCGCCGAGGAACTTGGCCTTGCTCACGGTCGCTACAAAGGAATCCCTCAGGTTCTGACCAGCGATTTCCTGGTGGATTTTGATGACCCCCAGCGCCCATCCGTCGCGATCCAGGCCAAGTACAGTGCCGATCTGCAGAAGCCGGAAGTCATCGAGAGACTTGAACTTGAAAGGCGCTACTGGCAGGAAAAAGGGATTCCCTGGTTCATCATCACGGAGCGCGAGGTATCCAGAGAGGCATTTGCCAATATCCAATGGCTCTATCCGGCCCATGCTGAAGACGACATTGCACAGGATGATCTCGCACACTATCAGCAGCTGTTCTTGCTCGAGTTTCAGCGTCACCCAGACCGGAAGCTGACCGCCATTGCCCAGGAAATGGATACTTCCGGCCAACTGGAGGCTGGTCAAGCACTCTATTGGCTACGCCAGCTGCTGGCTCGGCACTGGTTTCTCTTCGATCTTGACACCCCTTACCGCGTGCTGAAGCCGAAGGATCTAGCTGCCAACCCTCATCAGATTCATCAGGAGCTGATCAGTGTTGTCCGTTAATCAGGTGTTCCGTATGGGAGAGCTCCGAAAGCGCCTGCTCTGGTCCGGTA