Homologs in group_3580

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_19390 FBDBKF_19390 100.0 Morganella morganii S1 - head-tail connector protein
EHELCC_19270 EHELCC_19270 100.0 Morganella morganii S2 - head-tail connector protein
NLDBIP_19400 NLDBIP_19400 100.0 Morganella morganii S4 - head-tail connector protein
HKOGLL_19205 HKOGLL_19205 100.0 Morganella morganii S5 - head-tail connector protein

Distribution of the homologs in the orthogroup group_3580

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3580

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_19405
Feature type CDS
Gene -
Product head-tail connector protein
Location 9774 - 10094 (strand: -1)
Length 321 (nucleotides) / 106 (amino acids)

Contig

Accession ZDB_391
Length 13402 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3580
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF05135 Phage gp6-like head-tail connector protein

Protein Sequence

MLSLERAKQQVRLDQDFHDEDELLKSYIIAAGRLVENHTRRTLITDSDESPDPETTLVYGGDIEVAMLLLVGNWYANRESVVTGESVAVLPMAVDVLLQPYVRYLE

Flanking regions ( +/- flanking 50bp)

CCGGAAAAACCAGCTGCACCTGAATCTAAGCGTGGTGCTAAGGGGAAATAATGCTTTCTCTGGAACGTGCAAAACAACAGGTGAGACTGGATCAGGATTTCCATGATGAAGATGAGTTGCTGAAATCTTACATTATTGCCGCCGGCCGCCTGGTGGAAAATCACACCCGGCGTACCTTAATCACGGATTCTGATGAAAGCCCCGATCCGGAAACCACCCTGGTTTATGGCGGCGATATTGAGGTCGCTATGCTCCTGCTGGTGGGTAACTGGTATGCAAACCGCGAATCAGTTGTAACCGGTGAATCCGTGGCGGTGTTGCCGATGGCGGTTGATGTGCTGCTGCAACCTTATGTGAGGTACCTGGAATGAGCGGGTTACGTGCCGGTGAACTCAACAAACGCATCACCCTGTACCGGCCG