Homologs in group_2327

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18105 FBDBKF_18105 100.0 Morganella morganii S1 sgaB Phosphotransferase system, galactitol-specific IIB component
EHELCC_16805 EHELCC_16805 100.0 Morganella morganii S2 sgaB Phosphotransferase system, galactitol-specific IIB component
NLDBIP_17645 NLDBIP_17645 100.0 Morganella morganii S4 sgaB Phosphotransferase system, galactitol-specific IIB component
HKOGLL_17380 HKOGLL_17380 100.0 Morganella morganii S5 sgaB Phosphotransferase system, galactitol-specific IIB component
F4V73_RS10310 F4V73_RS10310 94.6 Morganella psychrotolerans - PTS sugar transporter subunit IIB
PMI_RS08710 PMI_RS08710 34.8 Proteus mirabilis HI4320 - PTS sugar transporter subunit IIB

Distribution of the homologs in the orthogroup group_2327

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2327

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q9EXD8 2.83e-05 42 29 1 71 1 ulaB Ascorbate-specific PTS system EIIB component Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_17565
Feature type CDS
Gene sgaB
Product Phosphotransferase system, galactitol-specific IIB component
Location 32507 - 32788 (strand: -1)
Length 282 (nucleotides) / 93 (amino acids)

Contig

Accession ZDB_379
Length 55765 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2327
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02302 PTS system, Lactose/Cellobiose specific IIB subunit

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3414 Carbohydrate transport and metabolism (G) G Phosphotransferase system, galactitol-specific IIB component

Kegg Ortholog Annotation(s)

Protein Sequence

MIKIRTVCGNGIGSSLMAANNVKKICEEMGIKADVASVDFANAVGEKADLYVTIKELASQFPPQCEVAVIRSYVHKAKIAEDIKDALLKLSQS

Flanking regions ( +/- flanking 50bp)

AACAAAGAACAGATTTTACAGTTTATCCGGACGTCGATAGAGAGGACAGCATGATTAAAATAAGAACAGTGTGCGGCAATGGTATCGGCAGCTCATTAATGGCCGCCAATAACGTGAAGAAAATTTGTGAGGAGATGGGTATAAAAGCCGATGTGGCTTCAGTGGATTTTGCAAATGCCGTGGGTGAGAAAGCGGATCTGTATGTCACGATTAAAGAGCTGGCATCACAATTTCCGCCGCAGTGTGAAGTTGCCGTGATCCGCAGTTATGTGCATAAAGCCAAAATTGCGGAAGATATTAAAGACGCTTTACTGAAACTGAGTCAGTCCTGATAGTTCATTCTTTTTACAGGAATTAAATTATGGCTTATATTCTCTCATTC