Homologs in group_3677

Help

3 homologs were identified in 3 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_15340 EHELCC_15340 100.0 Morganella morganii S2 secC Zinc chelation protein SecC
NLDBIP_15870 NLDBIP_15870 100.0 Morganella morganii S4 secC Zinc chelation protein SecC
HKOGLL_15090 HKOGLL_15090 100.0 Morganella morganii S5 secC Zinc chelation protein SecC

Distribution of the homologs in the orthogroup group_3677

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3677

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_15970
Feature type CDS
Gene secC
Product Zinc chelation protein SecC
Location 85968 - 86780 (strand: -1)
Length 813 (nucleotides) / 270 (amino acids)

Contig

Accession ZDB_374
Length 116739 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3677
Orthogroup size 4
N. genomes 4

Actions

Genomic region

Protein Sequence

MKIELTTLGDTVNPEIIKAIDSIKKEKSKAIKYGDEKKANEYWRVLKAFDLNVLYIRAFNNIKNKKYRDAWNELEQCEINYEFLSENSTENFLINTRSKFIIDKVLKWQSLYPYCLFISPGFKVGYYTCSICDHRVRPRSRCGHKKGKIYNGELCLHIAHDMEFLEFSIVSTPAQKYSVMHDDATLDFTLIQYISNILENAFEEWDLNRTTMRFPKERFANVRNEDDCPCKSGREFHSCCSDKKEIEIPHIDFILSKAIPPDKKEISFPY

Flanking regions ( +/- flanking 50bp)

AAAAATAGAAAACTTCAATGAAGTTCTAAATGCTGTCAAAGGATTTACTAATGAAAATTGAATTAACAACCTTAGGAGATACTGTAAATCCAGAAATTATTAAAGCAATTGATTCCATAAAAAAAGAAAAATCAAAAGCTATCAAATATGGCGATGAAAAAAAAGCCAATGAGTACTGGAGAGTACTTAAAGCATTTGATCTAAATGTGCTTTATATTCGAGCATTTAATAATATAAAAAATAAGAAATATAGAGATGCATGGAATGAACTCGAACAATGTGAAATAAATTATGAATTCCTTAGTGAAAATTCAACTGAAAATTTTTTAATTAATACAAGATCTAAGTTCATAATAGACAAGGTTCTTAAATGGCAGTCACTTTATCCGTATTGCCTGTTTATTAGTCCCGGTTTTAAAGTTGGTTACTATACCTGCAGTATCTGTGATCACAGAGTTAGACCAAGATCAAGGTGCGGACATAAAAAAGGTAAAATCTATAACGGTGAACTATGTCTTCATATAGCTCATGACATGGAATTCCTTGAGTTTTCAATTGTATCAACACCAGCTCAAAAGTATTCAGTAATGCATGATGATGCAACCCTTGATTTTACACTGATACAATATATATCAAATATTTTAGAAAATGCATTCGAGGAGTGGGATTTGAATAGAACAACTATGAGGTTTCCAAAAGAACGTTTTGCAAATGTGAGAAACGAGGATGATTGCCCTTGCAAAAGTGGCAGAGAGTTCCATAGTTGCTGTAGTGATAAAAAAGAAATTGAAATTCCACATATTGATTTCATACTTTCAAAAGCTATCCCTCCTGATAAAAAAGAAATTAGTTTTCCGTATTAGAAATAAATATGAGTTAGAGTACGGCCACTAGGGCAAGCACATGATGTTTT