Homologs in group_1544

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_10005 FBDBKF_10005 100.0 Morganella morganii S1 dsbD Thiol-disulfide interchange protein, contains DsbC and DsbD domains
EHELCC_04805 EHELCC_04805 100.0 Morganella morganii S2 dsbD Thiol-disulfide interchange protein, contains DsbC and DsbD domains
NLDBIP_04805 NLDBIP_04805 100.0 Morganella morganii S4 dsbD Thiol-disulfide interchange protein, contains DsbC and DsbD domains
HKOGLL_12710 HKOGLL_12710 100.0 Morganella morganii S5 dsbD Thiol-disulfide interchange protein, contains DsbC and DsbD domains
F4V73_RS00330 F4V73_RS00330 85.4 Morganella psychrotolerans - protein-disulfide reductase DsbD family protein
PMI_RS02165 PMI_RS02165 56.9 Proteus mirabilis HI4320 - protein-disulfide reductase DsbD family protein

Distribution of the homologs in the orthogroup group_1544

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1544

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A3N207 3.01e-23 108 27 17 446 3 dsbD Thiol:disulfide interchange protein DsbD Actinobacillus pleuropneumoniae serotype 5b (strain L20)
A5UI29 3.86e-22 104 26 12 373 3 dsbD Thiol:disulfide interchange protein DsbD Haemophilus influenzae (strain PittGG)
Q487R3 4.32e-22 104 25 20 506 3 dsbD Thiol:disulfide interchange protein DsbD Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
Q31T72 1.07e-21 103 25 19 517 3 dsbD Thiol:disulfide interchange protein DsbD Shigella boydii serotype 4 (strain Sb227)
Q0SXE3 1.14e-21 103 25 19 517 3 dsbD Thiol:disulfide interchange protein DsbD Shigella flexneri serotype 5b (strain 8401)
Q5QVU3 1.49e-21 102 26 11 385 3 dsbD Thiol:disulfide interchange protein DsbD Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR)
Q8CVH5 2.05e-21 102 25 19 517 3 dsbD Thiol:disulfide interchange protein DsbD Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P44919 2.08e-21 102 26 12 373 3 dsbD Thiol:disulfide interchange protein DsbD Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q3YUK4 2.12e-21 102 25 19 517 3 dsbD Thiol:disulfide interchange protein DsbD Shigella sonnei (strain Ss046)
Q1R3C4 3.31e-21 101 25 19 517 3 dsbD Thiol:disulfide interchange protein DsbD Escherichia coli (strain UTI89 / UPEC)
Q0T9Q5 3.31e-21 101 25 19 517 3 dsbD Thiol:disulfide interchange protein DsbD Escherichia coli O6:K15:H31 (strain 536 / UPEC)
P36655 4.32e-21 101 25 19 517 1 dsbD Thiol:disulfide interchange protein DsbD Escherichia coli (strain K12)
Q4QM23 6.29e-21 100 26 12 366 3 dsbD Thiol:disulfide interchange protein DsbD Haemophilus influenzae (strain 86-028NP)
Q15ZS2 6.78e-21 100 28 14 398 3 dsbD Thiol:disulfide interchange protein DsbD Pseudoalteromonas atlantica (strain T6c / ATCC BAA-1087)
Q328D2 1.05e-20 100 25 19 517 1 dsbD Thiol:disulfide interchange protein DsbD Shigella dysenteriae serotype 1 (strain Sd197)
P58162 1.44e-20 99 25 19 517 1 dsbD Thiol:disulfide interchange protein DsbD Escherichia coli O157:H7
Q7VMZ4 1.97e-20 99 27 17 469 3 dsbD Thiol:disulfide interchange protein DsbD Haemophilus ducreyi (strain 35000HP / ATCC 700724)
A5UDI9 2.56e-20 99 25 12 366 3 dsbD Thiol:disulfide interchange protein DsbD Haemophilus influenzae (strain PittEE)
A8AMR4 6.08e-20 97 27 18 459 3 dsbD Thiol:disulfide interchange protein DsbD Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
A6TH46 7.41e-20 97 27 12 385 3 dsbD Thiol:disulfide interchange protein DsbD Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
Q9KJZ3 8.95e-20 97 28 13 381 3 dsbD Thiol:disulfide interchange protein DsbD Pseudomonas sp. (strain JR1 / K1)
A7MMC7 5.38e-19 94 25 15 477 3 dsbD Thiol:disulfide interchange protein DsbD Cronobacter sakazakii (strain ATCC BAA-894)
Q87KW0 3.26e-18 92 25 9 395 3 dsbD Thiol:disulfide interchange protein DsbD Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q9KNN1 1.04e-17 90 24 10 412 3 dsbD Thiol:disulfide interchange protein DsbD Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q8ZKC3 4.09e-17 89 25 19 488 3 dsbD Thiol:disulfide interchange protein DsbD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q5PIQ0 1.88e-16 86 24 19 488 3 dsbD Thiol:disulfide interchange protein DsbD Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q9CP40 2.79e-16 86 27 16 380 3 dsbD Thiol:disulfide interchange protein DsbD Pasteurella multocida (strain Pm70)
Q8XV41 3.09e-16 86 25 13 382 3 dsbD Thiol:disulfide interchange protein DsbD Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
Q8Z1A8 5.83e-16 85 24 16 418 3 dsbD Thiol:disulfide interchange protein DsbD Salmonella typhi
Q8DCZ0 8.31e-16 84 25 11 395 3 dsbD Thiol:disulfide interchange protein DsbD Vibrio vulnificus (strain CMCP6)
Q7MGV6 2.05e-15 83 24 13 426 3 dsbD Thiol:disulfide interchange protein DsbD Vibrio vulnificus (strain YJ016)
Q7MZX2 2.35e-15 83 23 15 439 3 dsbD Thiol:disulfide interchange protein DsbD Photorhabdus laumondii subsp. laumondii (strain DSM 15139 / CIP 105565 / TT01)
Q4K909 5.69e-15 82 26 15 431 3 dsbD Thiol:disulfide interchange protein DsbD Pseudomonas fluorescens (strain ATCC BAA-477 / NRRL B-23932 / Pf-5)
A4TRR6 9.52e-15 81 25 14 381 3 dsbD Thiol:disulfide interchange protein DsbD Yersinia pestis (strain Pestoides F)
Q1CEC8 9.52e-15 81 25 14 381 3 dsbD Thiol:disulfide interchange protein DsbD Yersinia pestis bv. Antiqua (strain Nepal516)
Q8ZIY9 9.52e-15 81 25 14 381 3 dsbD Thiol:disulfide interchange protein DsbD Yersinia pestis
Q1C0X4 9.52e-15 81 25 14 381 3 dsbD Thiol:disulfide interchange protein DsbD Yersinia pestis bv. Antiqua (strain Antiqua)
Q57GQ5 1.05e-14 81 24 19 487 3 dsbD Thiol:disulfide interchange protein DsbD Salmonella choleraesuis (strain SC-B67)
Q6D9J6 1.17e-14 80 24 14 409 3 dsbD Thiol:disulfide interchange protein DsbD Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q66FE1 1.3e-14 80 25 14 381 3 dsbD Thiol:disulfide interchange protein DsbD Yersinia pseudotuberculosis serotype I (strain IP32953)
Q9XDB2 3.01e-14 79 25 13 410 3 dsbD Thiol:disulfide interchange protein DsbD Tatumella citrea
Q9JYM0 1.28e-13 77 24 16 423 1 dsbD Thiol:disulfide interchange protein DsbD Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
A1JIN7 1.91e-13 77 24 13 424 3 dsbD Thiol:disulfide interchange protein DsbD Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q9JTL9 3.56e-13 76 24 16 423 3 dsbD Thiol:disulfide interchange protein DsbD Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
Q2NW99 4.99e-12 72 26 13 369 3 dsbD Thiol:disulfide interchange protein DsbD Sodalis glossinidius (strain morsitans)
Q5HVG7 1.04e-10 68 25 14 376 3 dsbD Thiol:disulfide interchange protein DsbD Campylobacter jejuni (strain RM1221)
Q9PHR3 1.04e-10 68 25 14 376 3 dsbD Thiol:disulfide interchange protein DsbD Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168)
Q9I104 1.68e-10 67 25 11 351 3 dsbD2 Thiol:disulfide interchange protein DsbD 2 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9HUW5 1.33e-09 65 29 5 208 3 dsbD1 Thiol:disulfide interchange protein DsbD 1 Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
P9WG62 0.000865 46 24 7 239 4 dipZ Protein DipZ Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P59960 0.000865 46 24 7 239 4 dipZ Protein DipZ Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WG63 0.001 46 24 7 239 1 dipZ Protein DipZ Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_13825
Feature type CDS
Gene dsbD
Product Thiol-disulfide interchange protein, contains DsbC and DsbD domains
Location 48044 - 50080 (strand: 1)
Length 2037 (nucleotides) / 678 (amino acids)

Contig

Accession ZDB_371
Length 143607 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1544
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02683 Cytochrome C biogenesis protein transmembrane region
PF11412 Thiol:disulfide interchange protein DsbD, N-terminal
PF13899 Thioredoxin-like

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4232 Posttranslational modification, protein turnover, chaperones (O) O Thiol:disulfide interchange protein DsbD

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08344 suppressor for copper-sensitivity B - -

Protein Sequence

MRSVLTAFVLFLFTLTTVHAADTGWTEMPHNDHARVRVTSDQWKDGKLRLLLAVELQPGWKTYWQSPGEGGVAPELTWQEASAGTQWFWPAPQRFDVAGLSTQGYGGSVVFPLEVTAAQALPVLSGTLTLSTCSNVCILTDYPVSLDTSEPAPDDFDRQYAMAMQQVPQTGGDITTGGSRVNGGTLTMALHRPGGWQDPQLFFNADKETIFAAPSFTISGDNLTATVKVTDDWGEMPSDLNGKPLSVVVTDGPAAQALTTVIGSGPDIAAESGSDTSFIMLLLFALLGGLILNVMPCVLPVLAMKLGAVLYVENRERRMIRTQFLVSSSGIMVSFWILAALVSVLRLTQSAVGWGIQFQNPWFLGFMVVVTLLFSANLFGVFSIRLSSNATTKLATAGGKGMRGHFMEGMFATLLATPCTAPFLGTAVAFALVAPYSQLWMIFTALGLGMSLPWLLIAAFPGIARALPKPGRWMNGLRLVLGGMMFITALWLISLLIPHTGPETAAVMVGVVLLVLALLAFRRTGIKRGSAALVALLVAGGVWAGINMTDDRQQSLVSDQVDWQPLTEEAVNTALSQGKRVFVDVTAEWCVTCKANKYNVLLRDDVQDALREPDVVALRGDWTKPSPDINAFLQKRGHLAVPFNQIYGPALPDGEILSPLLDKETLLHLLNQSQGIEP

Flanking regions ( +/- flanking 50bp)

CAATCTGTGTATTGTCGGGTTTTTTGCTTAATTCGGAGATGAAAAAAATTATGCGTTCTGTATTAACAGCGTTTGTGCTGTTTTTGTTCACGCTGACCACTGTGCATGCGGCTGATACCGGCTGGACCGAAATGCCGCACAATGATCACGCCCGTGTCAGAGTCACATCAGATCAGTGGAAAGACGGAAAACTGCGTCTGCTGCTGGCGGTTGAATTACAACCCGGCTGGAAAACTTACTGGCAGTCACCGGGCGAGGGGGGCGTTGCCCCTGAACTGACATGGCAGGAGGCCTCCGCCGGAACACAGTGGTTCTGGCCCGCACCTCAGCGTTTTGATGTCGCAGGGCTCTCCACCCAGGGCTACGGCGGCAGTGTGGTGTTCCCGCTGGAAGTCACGGCGGCTCAGGCGCTGCCGGTGCTCAGCGGGACACTGACCTTATCCACATGCAGTAATGTCTGTATCCTGACCGATTATCCGGTCTCACTGGATACCTCAGAACCCGCGCCGGACGATTTTGACCGTCAGTATGCGATGGCCATGCAGCAGGTGCCGCAGACCGGCGGTGATATCACCACCGGCGGCAGCCGGGTGAACGGCGGGACGCTGACGATGGCACTGCACCGCCCGGGCGGCTGGCAGGATCCGCAGCTGTTTTTTAATGCGGATAAAGAAACCATTTTTGCCGCACCGTCATTTACGATTTCCGGGGATAATCTCACTGCCACCGTTAAAGTAACGGATGACTGGGGGGAAATGCCGTCAGATCTGAACGGAAAACCGCTGTCGGTCGTTGTGACAGACGGCCCGGCAGCGCAGGCGCTCACCACGGTGATCGGCAGCGGACCGGATATTGCGGCCGAATCCGGCAGTGATACCTCTTTTATTATGTTGCTGCTGTTTGCATTGCTGGGCGGGCTGATCCTCAACGTTATGCCGTGTGTTCTGCCGGTGCTGGCGATGAAACTCGGCGCTGTGCTGTATGTGGAAAACCGTGAGCGGCGGATGATCCGCACCCAGTTCCTGGTCTCCTCCTCCGGTATTATGGTCTCCTTCTGGATCCTCGCGGCGCTGGTGTCGGTATTACGCCTGACACAAAGTGCGGTCGGCTGGGGTATTCAGTTCCAGAACCCGTGGTTCCTCGGCTTTATGGTGGTGGTAACTTTACTGTTCAGTGCCAATCTGTTCGGTGTTTTTTCTATCCGTCTGAGCAGTAATGCAACCACAAAACTGGCGACTGCGGGCGGCAAAGGGATGCGCGGCCACTTTATGGAAGGTATGTTTGCCACGCTGCTGGCAACCCCCTGTACCGCGCCGTTCCTCGGCACCGCCGTTGCGTTTGCGCTGGTGGCTCCGTATTCACAGCTGTGGATGATTTTTACCGCGCTGGGGCTGGGGATGAGCCTGCCGTGGCTGCTGATCGCCGCGTTTCCGGGAATTGCCCGGGCGCTGCCGAAACCGGGCCGCTGGATGAACGGCCTGCGTCTGGTGCTGGGTGGCATGATGTTTATTACGGCACTGTGGCTGATCAGTCTGCTGATCCCGCACACCGGGCCGGAAACCGCTGCCGTGATGGTGGGAGTTGTGCTGCTGGTACTTGCGCTGCTGGCTTTCCGCCGTACCGGTATTAAGCGGGGATCTGCGGCACTGGTGGCACTGCTGGTGGCAGGAGGTGTCTGGGCCGGTATCAATATGACGGATGACCGGCAGCAGAGCCTGGTCAGTGATCAGGTGGACTGGCAGCCGCTGACGGAAGAGGCGGTGAACACCGCGCTTTCTCAGGGGAAACGGGTTTTTGTGGATGTGACCGCCGAATGGTGCGTGACCTGCAAAGCAAACAAATACAATGTATTATTACGCGATGATGTTCAGGACGCACTCCGTGAACCGGATGTTGTCGCACTGCGCGGGGACTGGACCAAACCGTCACCGGATATTAATGCGTTTTTACAGAAACGCGGGCATCTGGCTGTGCCGTTTAATCAGATTTACGGCCCTGCTTTACCTGATGGTGAAATCTTGTCACCATTGCTGGATAAAGAAACACTCTTACATCTGTTAAATCAGTCACAAGGAATTGAACCATGAAAAAAACACTCGCGGCTTTAATGATTGCTCCGCTTATCTTTACAGCCACA