Homologs in group_44

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13 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05110 FBDBKF_05110 100.0 Morganella morganii S1 cysB HTH-type transcriptional regulator CysB
FBDBKF_10650 FBDBKF_10650 46.3 Morganella morganii S1 cysB DNA-binding transcriptional regulator, LysR family
EHELCC_12480 EHELCC_12480 100.0 Morganella morganii S2 cysB HTH-type transcriptional regulator CysB
EHELCC_14985 EHELCC_14985 46.3 Morganella morganii S2 cysB DNA-binding transcriptional regulator, LysR family
NLDBIP_12820 NLDBIP_12820 100.0 Morganella morganii S4 cysB HTH-type transcriptional regulator CysB
NLDBIP_14815 NLDBIP_14815 46.3 Morganella morganii S4 cysB DNA-binding transcriptional regulator, LysR family
LHKJJB_14530 LHKJJB_14530 46.3 Morganella morganii S3 cysB DNA-binding transcriptional regulator, LysR family
HKOGLL_11295 HKOGLL_11295 100.0 Morganella morganii S5 cysB HTH-type transcriptional regulator CysB
HKOGLL_13150 HKOGLL_13150 46.3 Morganella morganii S5 cysB DNA-binding transcriptional regulator, LysR family
F4V73_RS05565 F4V73_RS05565 93.5 Morganella psychrotolerans cysB HTH-type transcriptional regulator CysB
F4V73_RS14360 F4V73_RS14360 46.0 Morganella psychrotolerans - LysR substrate-binding domain-containing protein
PMI_RS06380 PMI_RS06380 78.4 Proteus mirabilis HI4320 cysB HTH-type transcriptional regulator CysB
PMI_RS15975 PMI_RS15975 43.2 Proteus mirabilis HI4320 - LysR substrate-binding domain-containing protein

Distribution of the homologs in the orthogroup group_44

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_44

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P06614 0.0 539 78 0 322 1 cysB HTH-type transcriptional regulator CysB Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P45600 0.0 538 77 0 322 1 cysB HTH-type transcriptional regulator CysB Klebsiella pneumoniae
P0A9F3 0.0 538 77 0 322 3 cysB HTH-type transcriptional regulator CysB Escherichia coli (strain K12)
P0A9F4 0.0 538 77 0 322 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F5 0.0 538 77 0 322 3 cysB HTH-type transcriptional regulator CysB Escherichia coli O157:H7
P45105 4.03e-137 394 58 1 321 3 cysB HTH-type transcriptional regulator CysB Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
B4E8S9 1.51e-103 308 49 0 296 1 ssuR HTH-type transcriptional regulator SsuR Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
B4E8V9 4.9e-96 290 43 0 304 1 cysB HTH-type transcriptional regulator CysB Burkholderia cenocepacia (strain ATCC BAA-245 / DSM 16553 / LMG 16656 / NCTC 13227 / J2315 / CF5610)
Q47083 4.56e-79 246 39 0 313 1 cbl HTH-type transcriptional regulator cbl Escherichia coli (strain K12)
Q08598 1.95e-71 227 40 0 288 3 cbl HTH-type transcriptional regulator cbl Klebsiella aerogenes
P20668 2.63e-29 117 30 2 243 1 gltC Transcriptional dual regulator GltC Bacillus subtilis (strain 168)
Q8X4M5 4.9e-28 113 30 3 235 3 cynR HTH-type transcriptional regulator CynR Escherichia coli O157:H7
P27111 2.22e-26 108 29 3 235 1 cynR HTH-type transcriptional regulator CynR Escherichia coli (strain K12)
P52675 4.91e-26 103 42 0 136 3 cysB HTH-type transcriptional regulator CysB (Fragment) Thiocapsa roseopersicina
P39647 2.24e-25 106 27 3 261 1 cysL HTH-type transcriptional regulator CysL Bacillus subtilis (strain 168)
P0ACQ4 2.57e-25 106 26 5 286 1 oxyR DNA-binding transcriptional dual regulator OxyR Escherichia coli (strain K12)
P0ACQ5 2.57e-25 106 26 5 286 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACQ6 2.57e-25 106 26 5 286 3 oxyR Hydrogen peroxide-inducible genes activator Escherichia coli O157:H7
P37499 2.76e-25 105 26 3 246 3 yybE Uncharacterized HTH-type transcriptional regulator YybE Bacillus subtilis (strain 168)
P71318 5.28e-24 102 25 4 282 3 oxyR Hydrogen peroxide-inducible genes activator Pectobacterium carotovorum subsp. carotovorum
Q9X725 7.16e-24 102 26 4 282 3 oxyR Hydrogen peroxide-inducible genes activator Dickeya chrysanthemi
P96725 2.01e-23 100 29 6 250 3 ywqM Uncharacterized HTH-type transcriptional regulator YwqM Bacillus subtilis (strain 168)
O32255 4.6e-22 97 26 4 254 3 yvbU Uncharacterized HTH-type transcriptional regulator YvbU Bacillus subtilis (strain 168)
P25544 1.9e-21 95 26 6 282 3 rbcR RuBisCO operon transcriptional regulator Allochromatium vinosum
A0T0G2 6.96e-21 94 24 4 262 3 rbcR Probable RuBisCO transcriptional regulator Phaeodactylum tricornutum (strain CCAP 1055/1)
Q04778 8.21e-21 94 26 7 268 3 alsR HTH-type transcriptional regulator AlsR Bacillus subtilis (strain 168)
P49518 9.78e-21 94 25 5 264 3 rbcR Probable RuBisCO transcriptional regulator Trieres chinensis
Q85G62 2.29e-20 92 26 4 260 3 rbcR Probable RuBisCO transcriptional regulator Cyanidioschyzon merolae (strain NIES-3377 / 10D)
P48271 4.65e-20 92 26 5 256 3 rbcR Probable RuBisCO transcriptional regulator Cyanophora paradoxa
Q1XDT2 1.12e-19 90 26 5 260 3 rbcR Probable RuBisCO transcriptional regulator Neopyropia yezoensis
P51205 1.42e-19 90 26 5 260 3 rbcR Probable RuBisCO transcriptional regulator Porphyra purpurea
P39592 1.8e-19 90 23 5 271 3 ywbI Uncharacterized HTH-type transcriptional regulator YwbI Bacillus subtilis (strain 168)
A2CI69 1.12e-18 88 25 3 240 3 rbcR Probable RuBisCO transcriptional regulator Chlorokybus atmophyticus
O78432 2.37e-18 87 24 4 260 3 rbcR Probable RuBisCO transcriptional regulator Guillardia theta
O34827 2.41e-18 87 26 4 260 3 ykuM Uncharacterized HTH-type transcriptional regulator YkuM Bacillus subtilis (strain 168)
P73123 4.83e-18 87 25 6 269 3 rbcR Probable RuBisCO transcriptional regulator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q06610 5.03e-18 86 26 8 264 3 rbcR RuBisCO operon transcriptional regulator Acidithiobacillus ferrooxidans
P44418 5.58e-18 85 26 7 289 3 oxyR Hydrogen peroxide-inducible genes activator Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A0T0V5 7.13e-18 85 25 6 266 3 rbcR-A Probable RuBisCO transcriptional regulator Thalassiosira pseudonana
Q4G384 1.32e-17 85 24 4 256 3 rbcR Probable RuBisCO transcriptional regulator Emiliania huxleyi
Q3MCB5 1.67e-17 85 24 4 254 3 rbcR Probable RuBisCO transcriptional regulator Trichormus variabilis (strain ATCC 29413 / PCC 7937)
Q47141 4.6e-17 83 27 5 245 1 hcaR Hca operon transcriptional activator HcaR Escherichia coli (strain K12)
Q55459 4.93e-17 83 24 5 233 1 cmpR HTH-type transcriptional activator CmpR Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q5N5I5 6.44e-17 83 24 6 248 3 cmpR HTH-type transcriptional activator CmpR Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1)
Q9F1R2 6.44e-17 83 24 6 248 1 cmpR HTH-type transcriptional activator CmpR Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P44876 6.89e-17 83 21 1 236 3 HI_0775 Uncharacterized HTH-type transcriptional regulator HI_0775 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q8YQ82 9.47e-17 83 24 4 254 3 rbcR Probable RuBisCO transcriptional regulator Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Q6B936 2.49e-16 81 25 5 256 3 rbcR Probable RuBisCO transcriptional regulator Gracilaria tenuistipitata var. liui
P94403 3.02e-16 80 22 6 298 3 bsdA HTH-type transcriptional regulator BsdA Bacillus subtilis (strain 168)
P94387 3.04e-16 81 23 6 272 3 ycgK Uncharacterized HTH-type transcriptional regulator YcgK Bacillus subtilis (strain 168)
P94501 1.46e-15 79 22 5 279 1 gltR HTH-type transcriptional regulator GltR Bacillus subtilis (strain 168)
O35038 1.93e-15 79 26 3 225 3 ytlI HTH-type transcriptional regulator YtlI Bacillus subtilis (strain 168)
O19892 2.72e-15 78 22 5 267 3 rbcR Probable RuBisCO transcriptional regulator Cyanidium caldarium
P52696 6.03e-15 77 23 3 237 3 ybhD Uncharacterized HTH-type transcriptional regulator YbhD Escherichia coli (strain K12)
O34701 5.85e-14 74 25 9 284 3 yoaU Uncharacterized HTH-type transcriptional regulator YoaU Bacillus subtilis (strain 168)
Q81IX0 9.91e-14 73 25 9 295 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q63H01 1.07e-13 73 25 9 295 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ZK / E33L)
Q73EY2 1.07e-13 73 25 9 295 3 czcR HTH-type transcriptional regulator CzcR Bacillus cereus (strain ATCC 10987 / NRS 248)
P52691 1.15e-13 73 27 7 270 3 lrrA Probable HTH-type transcriptional regulator LrrA Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
Q6HPH4 1.16e-13 73 25 9 295 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis subsp. konkukian (strain 97-27)
A0R8S0 1.64e-13 73 25 9 295 3 czcR HTH-type transcriptional regulator CzcR Bacillus thuringiensis (strain Al Hakam)
Q81VJ1 1.78e-13 73 24 9 295 3 czcR HTH-type transcriptional regulator CzcR Bacillus anthracis
A7Z5E4 1.87e-13 72 22 4 240 3 yofA HTH-type transcriptional regulator YofA Bacillus velezensis (strain DSM 23117 / BGSC 10A6 / LMG 26770 / FZB42)
P03030 3.13e-13 72 26 4 246 3 lysR Transcriptional activator protein LysR Escherichia coli (strain K12)
P52661 1.68e-12 70 27 7 236 1 gbpR HTH-type transcriptional regulator GbpR Azospirillum brasilense
P52693 1.9e-12 70 24 5 264 3 ntcB Probable nitrogen assimilation transcriptional activator Synechococcus elongatus (strain ATCC 33912 / PCC 7942 / FACHB-805)
P45349 2.45e-12 70 25 6 272 3 metR HTH-type transcriptional regulator MetR Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P74422 2.72e-12 69 22 3 261 3 ntcB Probable nitrogen assimilation transcriptional activator Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P77744 4.66e-12 68 24 5 265 3 abgR HTH-type transcriptional regulator AbgR Escherichia coli (strain K12)
P77309 5.3e-12 68 21 6 282 3 yneJ Uncharacterized HTH-type transcriptional regulator YneJ Escherichia coli (strain K12)
P55181 5.84e-12 68 24 7 275 3 yxjO Uncharacterized HTH-type transcriptional regulator YxjO Bacillus subtilis (strain 168)
P77559 9.97e-12 68 27 8 249 3 ynfL Uncharacterized HTH-type transcriptional regulator YnfL Escherichia coli (strain K12)
Q9X5P2 1.26e-11 67 27 3 180 2 oxyR Probable hydrogen peroxide-inducible genes activator Streptomyces viridosporus
P42722 1.51e-11 67 24 6 248 3 cfxR HTH-type transcriptional regulator CfxR Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
Q44311 1.91e-11 67 21 10 303 3 soxR HTH-type transcriptional regulator SoxR Arthrobacter sp. (strain TE1826)
Q8KA72 2.08e-11 67 26 4 174 3 metR HTH-type transcriptional regulator MetR Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P0A9G1 2.48e-11 67 26 4 191 3 metR HTH-type transcriptional regulator MetR Shigella flexneri
P0A9F9 2.48e-11 67 26 4 191 1 metR HTH-type transcriptional regulator MetR Escherichia coli (strain K12)
P0A9G0 2.48e-11 67 26 4 191 3 metR HTH-type transcriptional regulator MetR Escherichia coli O157:H7
P0A2Q4 2.55e-11 67 25 4 199 3 metR HTH-type transcriptional regulator MetR Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q5 2.55e-11 67 25 4 199 3 metR HTH-type transcriptional regulator MetR Salmonella typhi
O07906 2.97e-11 66 27 1 126 3 yraN Uncharacterized HTH-type transcriptional regulator YraN Bacillus subtilis (strain 168)
P0A2Q2 1.02e-10 65 23 10 309 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2Q3 1.02e-10 65 23 10 309 3 ilvY HTH-type transcriptional activator IlvY Salmonella typhi
P52669 1.31e-10 64 20 4 248 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
P23841 1.73e-10 64 23 2 242 3 xapR HTH-type transcriptional regulator XapR Escherichia coli (strain K12)
P70785 4.85e-10 63 22 4 250 3 ttuA HTH-type transcriptional regulator TtuA Agrobacterium vitis
Q00678 5.58e-10 62 24 2 232 3 nocR Regulatory protein NocR Agrobacterium fabrum (strain C58 / ATCC 33970)
P35112 6.24e-10 62 24 2 232 3 nocR Regulatory protein NocR Agrobacterium tumefaciens (strain T37)
P44821 7.58e-10 62 23 4 235 3 ilvY HTH-type transcriptional activator IlvY Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O68014 7.86e-10 62 24 9 251 1 benM HTH-type transcriptional regulator BenM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Q9EXL7 9.72e-10 62 24 5 206 3 nagR HTH-type transcriptional activator NagR Ralstonia sp.
P07774 1.96e-09 61 24 11 310 1 catM HTH-type transcriptional regulator CatM Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
O06703 2.92e-09 60 24 5 273 3 bbuR HTH-type transcriptional regulator BbuR Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50)
P05827 4.3e-09 60 22 12 323 3 ilvY HTH-type transcriptional regulator IlvY Escherichia coli (strain K12)
P42427 4.98e-09 59 24 3 169 3 tfdT HTH-type transcriptional regulator TfdT Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
O87883 8.82e-09 57 27 3 180 3 oxyR Probable hydrogen peroxide-inducible genes activator (Fragment) Mycobacterium xenopi
O34685 1.09e-08 58 20 4 249 1 yofA HTH-type transcriptional regulator YofA Bacillus subtilis (strain 168)
P52670 3.29e-08 57 29 2 130 3 ilvR HTH-type transcriptional regulator IlvR Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
Q9HWH8 3.67e-08 57 27 3 147 3 nmoR HTH-type transcriptional regulator NmoR Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O33812 4.6e-08 57 23 9 251 3 None Uncharacterized HTH-type transcriptional regulator in lacR 5'region (Fragment) Staphylococcus xylosus
O33945 4.63e-08 57 20 6 252 3 None Probable cat1 operon transcriptional activator Acinetobacter lwoffii
P52595 5.07e-08 57 26 8 251 3 cbbR HTH-type transcriptional regulator CbbR Rhodospirillum rubrum
Q46M57 5.52e-08 57 30 4 130 1 tfdR HTH-type transcriptional regulator TdfR Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
Q46M54 6.22e-08 56 30 4 130 1 tfdS HTH-type transcriptional regulator TfdS Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
P0ACR4 6.38e-08 56 23 6 259 1 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli (strain K12)
P0ACR5 6.38e-08 56 23 6 259 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACR6 6.38e-08 56 23 6 259 3 yeiE Uncharacterized HTH-type transcriptional regulator YeiE Escherichia coli O157:H7
P52667 7.05e-08 56 26 2 145 3 estR HTH-type transcriptional regulator EstR Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)
Q88JX7 9.06e-08 56 24 4 216 3 galR HTH-type transcriptional regulator GalR Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
P52666 1.41e-07 55 26 5 195 3 budR HTH-type transcriptional regulator BudR Raoultella terrigena
O87324 1.42e-07 55 24 6 260 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium marinum
Q9JXW7 3.05e-07 54 24 12 262 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
P30864 3.1e-07 54 23 6 262 3 yafC Uncharacterized HTH-type transcriptional regulator YafC Escherichia coli (strain K12)
P52684 3.33e-07 54 21 6 233 3 mauR Malonate utilization transcriptional regulator Klebsiella pneumoniae
Q9JPU9 3.6e-07 54 24 12 262 1 crgA HTH-type transcriptional regulator CrgA Neisseria meningitidis serogroup C (strain 8013)
P77171 3.98e-07 54 25 6 222 3 ydcI Uncharacterized HTH-type transcriptional regulator YdcI Escherichia coli (strain K12)
P52665 1.48e-06 50 31 4 130 3 budR HTH-type transcriptional regulator BudR (Fragment) Klebsiella aerogenes
P52677 1.48e-06 52 24 6 279 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium avium
Q765S2 1.97e-06 52 24 5 195 3 allS HTH-type transcriptional activator AllS Klebsiella pneumoniae
P0ACQ9 2.44e-06 52 23 6 220 3 tdcA HTH-type transcriptional regulator TdcA Shigella flexneri
P0ACQ7 2.44e-06 52 23 6 220 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli (strain K12)
P0ACQ8 2.44e-06 52 23 6 220 3 tdcA HTH-type transcriptional regulator TdcA Escherichia coli O157:H7
P94678 3.53e-06 51 25 3 180 1 tsaR HTH-type transcriptional regulator TsaR Comamonas testosteroni
P27102 6.1e-06 50 22 8 307 3 tcbR HTH-type transcriptional regulator TcbR Pseudomonas sp. (strain P51)
P20667 9.07e-06 50 24 10 287 3 catR HTH-type transcriptional regulator CatR Pseudomonas putida
Q05840 9.1e-06 50 30 2 98 3 clcR HTH-type transcriptional regulator ClcR Pseudomonas putida
P0ACR8 1.08e-05 50 19 3 246 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Shigella flexneri
P0ACR7 1.08e-05 50 19 3 246 3 yfeR Uncharacterized HTH-type transcriptional regulator YfeR Escherichia coli (strain K12)
P0A4T3 1.63e-05 49 25 3 186 1 occR Octopine catabolism/uptake operon regulatory protein OccR Rhizobium radiobacter
P0A4T4 1.63e-05 49 25 3 186 1 occR Octopine catabolism/uptake operon regulatory protein OccR Agrobacterium tumefaciens (strain Ach5)
P0A9F6 1.81e-05 49 26 5 145 1 gcvA Glycine cleavage system transcriptional activator Escherichia coli (strain K12)
P0A9F7 1.81e-05 49 26 5 145 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0A9F8 1.81e-05 49 26 5 145 3 gcvA Glycine cleavage system transcriptional activator Escherichia coli O157:H7
P10183 2.07e-05 49 22 5 227 3 nahR HTH-type transcriptional activator NahR Pseudomonas putida
P77333 2.2e-05 48 25 1 115 1 pgrR HTH-type transcriptional regulator PgrR Escherichia coli (strain K12)
P52689 8.55e-05 47 24 4 125 3 ltrA Probable HTH-type transcriptional regulator LtrA Klebsiella pneumoniae
P0A4T7 9.25e-05 47 23 6 192 3 pcaQ HTH-type transcriptional regulator PcaQ Rhizobium radiobacter
P0A4T6 9.25e-05 47 23 6 192 3 pcaQ HTH-type transcriptional regulator PcaQ Agrobacterium fabrum (strain C58 / ATCC 33970)
P25547 0.000105 47 21 5 232 3 gbpR HTH-type transcriptional regulator GbpR Rhizobium radiobacter
P52660 0.00017 46 27 4 137 3 blaA HTH-type transcriptional regulator BlaA Proteus vulgaris
B1JQ39 0.00018 46 27 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66G51 0.00018 46 27 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TRF4 0.00018 46 27 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis (strain Pestoides F)
Q1CNN4 0.00018 46 27 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Nepal516)
A9R8E7 0.00018 46 27 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Angola)
Q8ZAA7 0.00018 46 27 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis
B2JZG4 0.00018 46 27 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CBT5 0.00018 46 27 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pestis bv. Antiqua (strain Antiqua)
A7FD20 0.00018 46 27 5 152 3 hdfR HTH-type transcriptional regulator HdfR Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
P46068 0.000234 45 28 2 117 2 dsdC HTH-type transcriptional regulator DsdC Escherichia coli (strain K12)
P12529 0.000235 45 27 4 127 1 ampR HTH-type transcriptional activator AmpR Citrobacter freundii
A0A0H2ZDG9 0.000401 45 25 2 125 3 PA14_22550 HTH-type transcriptional repressor PA14_22550 Pseudomonas aeruginosa (strain UCBPP-PA14)
P39127 0.000426 45 22 10 250 3 citR HTH-type transcriptional regulator CitR Bacillus subtilis (strain 168)
P52678 0.000623 44 23 5 249 3 oxyR Probable hydrogen peroxide-inducible genes activator Mycobacterium leprae (strain TN)
P52658 0.001 43 27 5 147 3 ampR HTH-type transcriptional activator AmpR Citrobacter koseri
A1JI47 0.001 43 27 4 148 3 hdfR HTH-type transcriptional regulator HdfR Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_12680
Feature type CDS
Gene cysB
Product HTH-type transcriptional regulator CysB
Location 152743 - 153717 (strand: 1)
Length 975 (nucleotides) / 324 (amino acids)

Contig

Accession ZDB_369
Length 181491 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_44
Orthogroup size 14
N. genomes 7

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Genomic region

Domains

PF00126 Bacterial regulatory helix-turn-helix protein, lysR family
PF03466 LysR substrate binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0583 Transcription (K) K DNA-binding transcriptional regulator, LysR family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K13634 LysR family transcriptional regulator, cys regulon transcriptional activator - -

Protein Sequence

MKLQQLRYIVEVVNHNLNVSSTAEGLYTSQPGISKQIRMLEDELGMQIFARSGKHLTHVTPAGESVIRISREVLAKIDAIKAVASEHTYPEQGTLSIATTHTQARYALPPVIKGFIERYPHVSLHMHQGTPTQIAEDVCKGNSDFAIATEALHLYNDLIMLPCYQWNRAVVVRRDHPLAQRRDLTIADIAEYEIVTYTHGFTGRSELDSTFEKQGLKPKVVFTATDADVIKTYVRLGLGIGIIASMAVDPETDKDLVSIDMRDKFSYSTTKIGFRRGSFLRTYMYDFMWRFAPHLTRDVVDKAIALRNNEDIEAMFKDIPLPIV

Flanking regions ( +/- flanking 50bp)

GATGAAAAAGGAGTAAGCAATGCCGAGCCTGCACGGAAAGGAATAAGCGGATGAAATTACAGCAGCTGCGCTATATTGTGGAAGTGGTTAATCACAATCTGAATGTCTCCTCGACTGCCGAGGGGCTGTACACATCACAACCCGGTATCAGTAAGCAGATCCGGATGCTGGAAGATGAGCTGGGAATGCAGATTTTTGCCCGCAGCGGTAAACATCTGACCCATGTGACACCGGCCGGGGAATCCGTTATCCGGATCTCACGTGAAGTGCTGGCGAAAATTGATGCCATCAAGGCTGTCGCCAGTGAGCACACGTATCCGGAGCAGGGAACCCTGAGTATCGCCACGACCCATACCCAGGCGCGTTATGCACTGCCGCCGGTAATTAAAGGCTTTATTGAGCGTTATCCGCACGTTTCCCTGCATATGCACCAGGGCACACCGACACAGATAGCCGAGGATGTCTGCAAAGGCAACAGTGATTTCGCTATCGCGACAGAAGCCCTGCATCTGTATAACGATTTGATTATGCTGCCGTGCTATCAGTGGAACCGGGCCGTGGTGGTCCGCCGTGATCACCCGCTGGCACAGCGGCGTGATCTGACTATCGCGGATATCGCGGAGTATGAAATTGTCACCTATACCCACGGTTTCACCGGCCGTTCCGAGCTGGACAGCACCTTTGAAAAACAGGGGCTGAAGCCGAAAGTGGTCTTTACCGCAACAGATGCGGATGTGATTAAAACCTATGTCCGTCTCGGGCTCGGGATCGGGATTATTGCCAGTATGGCGGTCGATCCGGAGACGGATAAAGACCTCGTCAGTATCGATATGCGGGATAAATTCAGCTACAGCACCACAAAAATCGGTTTCCGGCGCGGCAGTTTCCTGAGAACCTATATGTATGATTTTATGTGGCGTTTCGCGCCGCATCTGACGCGCGATGTGGTGGATAAAGCGATTGCGCTGCGTAATAATGAAGACATCGAAGCCATGTTTAAAGACATTCCGCTGCCGATTGTCTGAATACTTATTATCAGGGGAACTGATGAGTAAATTATCCGCACTGACAGGCG