Homologs in group_2012

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15120 FBDBKF_15120 100.0 Morganella morganii S1 yafJ putative glutamine amidotransferase YafJ
EHELCC_11125 EHELCC_11125 100.0 Morganella morganii S2 yafJ putative glutamine amidotransferase YafJ
NLDBIP_11470 NLDBIP_11470 100.0 Morganella morganii S4 yafJ putative glutamine amidotransferase YafJ
HKOGLL_09940 HKOGLL_09940 100.0 Morganella morganii S5 yafJ putative glutamine amidotransferase YafJ
F4V73_RS12325 F4V73_RS12325 86.8 Morganella psychrotolerans - class II glutamine amidotransferase
PMI_RS01675 PMI_RS01675 75.7 Proteus mirabilis HI4320 - class II glutamine amidotransferase

Distribution of the homologs in the orthogroup group_2012

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2012

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q47147 2.44e-141 399 74 0 253 1 yafJ Putative glutamine amidotransferase YafJ Escherichia coli (strain K12)
P44098 3.42e-87 264 47 1 257 4 HI_1037 Putative glutamine amidotransferase HI_1037 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q58910 1.25e-47 164 37 4 256 3 MJ1515 Uncharacterized protein MJ1515 Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P54004 3.72e-05 47 23 11 212 4 slr0199 Putative glutamine amidotransferase slr0199 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q9KG45 6.48e-05 47 30 4 125 3 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
P53871 7.96e-05 47 25 7 194 1 DUG3 Probable glutamine amidotransferase DUG3 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q8ETM5 0.000323 45 26 5 150 3 glmS Glutamine--fructose-6-phosphate aminotransferase [isomerizing] Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
O26742 0.000604 44 23 9 260 3 purF Amidophosphoribosyltransferase Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_11330
Feature type CDS
Gene yafJ
Product putative glutamine amidotransferase YafJ
Location 49316 - 50092 (strand: -1)
Length 777 (nucleotides) / 258 (amino acids)

Contig

Accession ZDB_368
Length 188522 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2012
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF13230 Glutamine amidotransferases class-II

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0121 General function prediction only (R) R Predicted glutamine amidotransferase YafJ

Protein Sequence

MCELLGMSANVPTDIHFSLSGLIPRGGETGPHKDGWGITFYEGMGCRTFKDARACCNSPVARFVRDYPVKSEAVIAHIRQANRGVVSLENTHPFTRELWGRNWTYAHNGQLSGYEHLPTGFFTPVGQTDSEHAFCWLLNQLKEKYPQPPQDLQTVFREIKRLADVLRQFGVFNMLLSDGSYVLAYCSTNLHWITRRAPFGKARLVDSDVEIDFSQHTRPDDVVSVIATQPLTGNEQWQKIGPGEAVLFYYGERDESVF

Flanking regions ( +/- flanking 50bp)

AGGTAACAATAGTCCTCAGTCATCACAAAAACGGGTAAGGGAGAAAGGCGATGTGTGAATTGCTGGGGATGAGTGCGAATGTCCCGACTGATATTCATTTCAGTCTCAGTGGCCTGATCCCGCGTGGCGGCGAAACCGGGCCGCATAAAGACGGGTGGGGAATTACGTTTTATGAAGGAATGGGCTGCCGGACATTCAAAGACGCCCGTGCCTGCTGCAACTCCCCCGTTGCCCGTTTTGTCCGTGACTATCCTGTCAAATCCGAAGCGGTGATCGCCCATATCCGCCAGGCAAACAGAGGGGTGGTATCACTGGAAAATACCCACCCTTTTACCCGCGAACTGTGGGGGCGGAACTGGACATATGCCCATAACGGGCAGCTCAGCGGCTATGAGCATCTGCCGACCGGTTTTTTTACCCCGGTCGGCCAGACTGACAGCGAGCATGCATTCTGCTGGCTGCTGAATCAGCTGAAAGAAAAATACCCGCAGCCGCCGCAGGATCTGCAGACAGTATTCCGTGAAATTAAACGGCTGGCGGATGTGCTGCGGCAGTTTGGTGTCTTTAATATGCTGCTGTCAGACGGCAGCTATGTGCTGGCGTACTGTTCAACGAATCTGCACTGGATCACCCGCCGCGCACCTTTTGGTAAGGCGCGGTTGGTGGACAGTGATGTGGAGATTGATTTCTCACAGCATACCCGGCCGGATGATGTGGTGTCTGTGATTGCCACGCAACCGCTGACCGGCAATGAACAGTGGCAGAAAATCGGGCCCGGCGAAGCCGTTCTCTTTTATTACGGCGAACGGGATGAGTCCGTGTTCTGAGTCAGCAAACCGGTATCCGCTGCCGGTGCCGGTAAAGCTGAATGTGCAGC