Homologs in group_2020

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15160 FBDBKF_15160 100.0 Morganella morganii S1 apbE FAD:protein FMN transferase ApbE
EHELCC_11085 EHELCC_11085 100.0 Morganella morganii S2 apbE FAD:protein FMN transferase ApbE
NLDBIP_11430 NLDBIP_11430 100.0 Morganella morganii S4 apbE FAD:protein FMN transferase ApbE
HKOGLL_09900 HKOGLL_09900 100.0 Morganella morganii S5 apbE FAD:protein FMN transferase ApbE
F4V73_RS12285 F4V73_RS12285 88.1 Morganella psychrotolerans - FAD:protein FMN transferase
PMI_RS01715 PMI_RS01715 74.3 Proteus mirabilis HI4320 - FAD:protein FMN transferase

Distribution of the homologs in the orthogroup group_2020

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2020

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A5F5Y3 1.73e-139 401 62 2 316 1 apbE FAD:protein FMN transferase Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
P44550 1.82e-123 361 51 5 350 3 apbE FAD:protein FMN transferase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P41780 8.09e-95 288 44 7 337 1 apbE FAD:protein FMN transferase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0AB85 1.14e-90 278 42 6 347 1 apbE FAD:protein FMN transferase Escherichia coli (strain K12)
P0AB86 1.14e-90 278 42 6 347 3 apbE FAD:protein FMN transferase Escherichia coli O157:H7
B5XP00 9.78e-88 270 41 6 345 3 apbE1 FAD:protein FMN transferase Klebsiella pneumoniae (strain 342)
O85292 2.74e-55 187 32 6 322 3 apbE FAD:protein FMN transferase Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
Q89AP6 6.01e-47 165 30 5 318 3 apbE FAD:protein FMN transferase Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
Q9PKW2 7.3e-35 132 28 9 328 3 apbE FAD:protein FMN transferase Chlamydia muridarum (strain MoPn / Nigg)
O84080 3.32e-33 128 26 9 331 3 apbE FAD:protein FMN transferase Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q9Z8K2 1.53e-31 124 28 8 303 3 apbE FAD:protein FMN transferase Chlamydia pneumoniae
B5XRA9 1.65e-29 118 29 5 256 3 apbE2 FAD:protein FMN transferase Klebsiella pneumoniae (strain 342)
Q52718 1.05e-27 116 31 7 233 3 rnfF FAD:protein FMN transferase Rhodobacter capsulatus
O83774 1.27e-20 94 26 7 276 1 apbE FAD:protein FMN transferase Treponema pallidum (strain Nichols)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_11290
Feature type CDS
Gene apbE
Product FAD:protein FMN transferase ApbE
Location 41239 - 42276 (strand: -1)
Length 1038 (nucleotides) / 345 (amino acids)

Contig

Accession ZDB_368
Length 188522 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2020
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02424 ApbE family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1477 Coenzyme transport and metabolism (H)
Posttranslational modification, protein turnover, chaperones (O)		 HO FAD:protein FMN transferase ApbE

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03734 FAD:protein FMN transferase [EC:2.7.1.180] - -

Protein Sequence

MVKIKRAFLPLALMALLLSACGDNTPETQQVTLNGKTMGTYYAIKYVADQKEPSAESLQKGIDVVLEEVNDQMSTYRPDSELSRFNQSREVNTPFPVSAATAKVVREAIRINQLTDGALDVTVGPLVNLWGFGPEGRVTHVPTEQDIETRRQWTGIDKLKVEGNNLIKTVPELYVDLSSIAKGYGVDAVAEYLESQNIRNYMVDVGGEVRTQGINGKGKPWRIAIEKPSSQGLSQSAQEIIEPGNASVATSGDYRNYFEENNVRYSHTIDPKTARPINHNLVSITVIADNCMSADGFSTGLNVLGPERGLEVANAQNIPVFMIVKTEKGFEERYSEAFKPYLQQK

Flanking regions ( +/- flanking 50bp)

TGCGCCCACACCTGTGGGCGCAGATGATCTGAAATCAGACTGGATTGTATATGGTAAAAATAAAACGGGCTTTCCTGCCGTTGGCACTGATGGCATTGTTACTGAGCGCGTGCGGTGATAACACTCCGGAAACACAGCAGGTAACCCTGAACGGCAAAACGATGGGTACCTATTACGCGATAAAATATGTCGCTGATCAGAAAGAGCCATCGGCGGAATCACTGCAGAAAGGCATTGATGTGGTGCTGGAAGAGGTCAATGACCAGATGTCCACCTACCGGCCGGATTCTGAACTCAGCCGTTTTAATCAGAGCCGTGAGGTGAATACGCCGTTTCCGGTCTCCGCCGCGACGGCAAAAGTGGTTCGTGAGGCTATTCGTATTAATCAGCTGACAGACGGCGCGCTGGATGTCACCGTCGGCCCGCTGGTCAATTTATGGGGATTTGGTCCGGAAGGGCGCGTGACCCATGTGCCGACAGAGCAGGATATAGAAACCCGCCGTCAGTGGACCGGAATTGATAAACTGAAGGTTGAAGGCAATAATCTGATTAAGACCGTGCCGGAACTGTATGTGGATCTGTCCTCGATTGCCAAAGGCTACGGGGTGGATGCGGTGGCAGAATACCTGGAATCACAGAATATCCGTAATTATATGGTGGATGTGGGCGGTGAAGTCCGGACTCAGGGTATTAACGGCAAAGGCAAACCGTGGCGCATTGCGATTGAAAAACCATCGTCACAGGGGCTGAGCCAGTCTGCACAGGAGATCATTGAGCCGGGGAATGCCTCTGTGGCCACATCCGGGGATTACCGGAATTATTTTGAAGAAAATAATGTCCGTTATTCACATACCATTGATCCGAAAACAGCACGCCCGATTAACCATAATCTGGTATCGATTACGGTGATTGCTGATAATTGCATGAGTGCGGATGGCTTTTCTACCGGACTGAATGTGCTCGGGCCGGAGCGCGGGCTTGAAGTGGCGAATGCGCAAAATATCCCTGTTTTTATGATTGTCAAAACAGAGAAGGGATTTGAAGAACGCTACAGTGAGGCATTTAAGCCCTATTTGCAGCAAAAATAAAAGGAGGTGGCTGATATGATGATAAAAGTATTTATCGCAACCTTTATCCT