Homologs in group_3080

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18850 FBDBKF_18850 100.0 Morganella morganii S1 cbiN energy-coupling factor ABC transporter substrate-binding protein
EHELCC_17045 EHELCC_17045 100.0 Morganella morganii S2 cbiN energy-coupling factor ABC transporter substrate-binding protein
NLDBIP_18425 NLDBIP_18425 100.0 Morganella morganii S4 cbiN energy-coupling factor ABC transporter substrate-binding protein
HKOGLL_08750 HKOGLL_08750 100.0 Morganella morganii S5 cbiN energy-coupling factor ABC transporter substrate-binding protein
F4V73_RS13745 F4V73_RS13745 98.9 Morganella psychrotolerans - energy-coupling factor ABC transporter substrate-binding protein

Distribution of the homologs in the orthogroup group_3080

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3080

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
B4SWZ0 5.36e-42 135 70 0 89 3 cbiN Cobalt transport protein CbiN Salmonella newport (strain SL254)
A6TDB4 5.78e-42 135 69 0 89 3 cbiN Cobalt transport protein CbiN Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
Q05595 8.49e-42 134 70 0 89 1 cbiN Cobalt transport protein CbiN Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TZQ1 8.49e-42 134 70 0 89 3 cbiN Cobalt transport protein CbiN Salmonella schwarzengrund (strain CVM19633)
B4T8X4 8.49e-42 134 70 0 89 3 cbiN Cobalt transport protein CbiN Salmonella heidelberg (strain SL476)
B5QYX9 8.49e-42 134 70 0 89 3 cbiN Cobalt transport protein CbiN Salmonella enteritidis PT4 (strain P125109)
B5FLZ0 8.49e-42 134 70 0 89 3 cbiN Cobalt transport protein CbiN Salmonella dublin (strain CT_02021853)
B5EWY8 8.49e-42 134 70 0 89 3 cbiN Cobalt transport protein CbiN Salmonella agona (strain SL483)
A9MLS2 1.14e-41 134 70 0 89 3 cbiN Cobalt transport protein CbiN Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
A8AEQ5 1.26e-41 134 69 0 89 3 cbiN Cobalt transport protein CbiN Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
A9MT98 1.33e-41 134 69 0 89 3 cbiN Cobalt transport protein CbiN Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
B5XUV2 1.39e-41 134 69 0 89 3 cbiN Cobalt transport protein CbiN Klebsiella pneumoniae (strain 342)
Q8Z5N3 2.13e-41 134 69 0 89 3 cbiN Cobalt transport protein CbiN Salmonella typhi
B5BG54 2.13e-41 134 69 0 89 3 cbiN Cobalt transport protein CbiN Salmonella paratyphi A (strain AKU_12601)
C0Q1Q4 2.13e-41 134 69 0 89 3 cbiN Cobalt transport protein CbiN Salmonella paratyphi C (strain RKS4594)
Q5PDU6 2.13e-41 134 69 0 89 3 cbiN Cobalt transport protein CbiN Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q57MX5 2.13e-41 134 69 0 89 3 cbiN Cobalt transport protein CbiN Salmonella choleraesuis (strain SC-B67)
B5RBL2 6.68e-41 132 69 0 89 3 cbiN Cobalt transport protein CbiN Salmonella gallinarum (strain 287/91 / NCTC 13346)
Q8XNY9 1.95e-29 103 58 0 85 3 cbiN Cobalt transport protein CbiN Clostridium perfringens (strain 13 / Type A)
O68104 2.26e-20 80 45 1 88 1 cbiN Cobalt transport protein CbiN Rhodobacter capsulatus (strain ATCC BAA-309 / NBRC 16581 / SB1003)
O29529 3.02e-20 80 54 1 66 3 cbiN Cobalt transport protein CbiN Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q8YQ90 1.81e-19 78 41 1 86 3 cbiN Cobalt transport protein CbiN Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
O26234 9.48e-18 73 44 4 95 3 cbiN Cobalt transport protein CbiN Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
Q50799 1.18e-17 73 44 3 94 3 cbiN Cobalt transport protein CbiN Methanothermobacter marburgensis (strain ATCC BAA-927 / DSM 2133 / JCM 14651 / NBRC 100331 / OCM 82 / Marburg)
A4FW42 2.72e-17 73 41 2 97 3 cbiN Cobalt transport protein CbiN Methanococcus maripaludis (strain C5 / ATCC BAA-1333)
A9A9I2 9.34e-17 71 39 1 88 3 cbiN Cobalt transport protein CbiN Methanococcus maripaludis (strain C6 / ATCC BAA-1332)
Q6LX70 9.79e-17 71 39 2 94 3 cbiN Cobalt transport protein CbiN Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
A6VH67 1.63e-16 70 39 1 88 3 cbiN Cobalt transport protein CbiN Methanococcus maripaludis (strain C7 / ATCC BAA-1331)
A6UQC5 3.15e-16 70 48 0 64 3 cbiN Cobalt transport protein CbiN Methanococcus vannielii (strain ATCC 35089 / DSM 1224 / JCM 13029 / OCM 148 / SB)
Q9HPH5 1.78e-15 68 47 0 69 3 cbiN Cobalt transport protein CbiN Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
B0R610 1.78e-15 68 47 0 69 3 cbiN Cobalt transport protein CbiN Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)
O54189 6.08e-15 67 54 1 61 3 cbiN Cobalt transport protein CbiN Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145)
Q58490 9.86e-08 48 54 1 44 3 cbiN Cobalt transport protein CbiN Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_09200
Feature type CDS
Gene cbiN
Product energy-coupling factor ABC transporter substrate-binding protein
Location 175936 - 176214 (strand: 1)
Length 279 (nucleotides) / 92 (amino acids)

Contig

Accession ZDB_365
Length 192330 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3080
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF02553 Cobalt transport protein component CbiN

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1930 Inorganic ion transport and metabolism (P) P ABC-type cobalt transport system, periplasmic component

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02009 cobalt/nickel transport protein ABC transporters -

Protein Sequence

MKKTLILLFLTVAIFIIPFFIDHGGEYGGSDDQAEQQILAIAPDYEPWFESLYEPASGEIESLLFTLQGCLGTAVIFYVLGYYRSGRKNAKP

Flanking regions ( +/- flanking 50bp)

GTTTATGATCAGCTGGTGAAACGTAACCTGGTGGGTAACGAGGTGCGGGCATGAAAAAGACACTGATTTTACTGTTTCTGACTGTTGCGATTTTTATCATCCCGTTCTTTATCGATCATGGCGGTGAATACGGCGGTTCAGACGATCAGGCAGAGCAGCAGATCCTCGCTATCGCGCCGGATTATGAGCCCTGGTTTGAGTCTCTGTACGAACCGGCCAGTGGTGAAATCGAAAGTCTGCTGTTTACATTACAGGGCTGTCTGGGCACTGCAGTGATTTTCTACGTGCTCGGTTACTACCGCAGCGGCCGGAAAAATGCAAAGCCTTGATGCGCTGAGTTATCAAAGCCGCTGGCGTCAGCGTGACCCGGGGATGAAGT