Homologs in group_2758

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07700 FBDBKF_07700 100.0 Morganella morganii S1 yqeC selenium cofactor biosynthesis protein YqeC
EHELCC_13530 EHELCC_13530 100.0 Morganella morganii S2 yqeC selenium cofactor biosynthesis protein YqeC
NLDBIP_13975 NLDBIP_13975 100.0 Morganella morganii S4 yqeC selenium cofactor biosynthesis protein YqeC
HKOGLL_08425 HKOGLL_08425 100.0 Morganella morganii S5 yqeC selenium cofactor biosynthesis protein YqeC
F4V73_RS13400 F4V73_RS13400 88.2 Morganella psychrotolerans yqeC selenium cofactor biosynthesis protein YqeC

Distribution of the homologs in the orthogroup group_2758

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2758

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q46809 2.21e-71 223 46 1 248 4 yqeC Uncharacterized protein YqeC Escherichia coli (strain K12)
Q82VS8 0.000331 45 37 1 74 3 murE UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase Nitrosomonas europaea (strain ATCC 19718 / CIP 103999 / KCTC 2705 / NBRC 14298)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_08875
Feature type CDS
Gene yqeC
Product selenium cofactor biosynthesis protein YqeC
Location 106355 - 107170 (strand: -1)
Length 816 (nucleotides) / 271 (amino acids)

Contig

Accession ZDB_365
Length 192330 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2758
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF19842 YqeC protein

Protein Sequence

MTMTTALNTQIPVRSCATIPEPLRRLCDTHPGGHAMVISIVGAGGKTSCLFWLAQAFSQLGKKVMITTTTHMFLPREGFPVILACHPVRLPDAVTNRGSFACYTGWNPLNNKVRGFSSADINALAEQNAVDVILAEADGARGFGIKAPAEHEPCIPDYSDCVIAVTDGRLLGAPVGPDNVHRWSHFSAVTGLNSGDTLDLGAISRLIRHPQGMWKSAPPDALRIWLINRFSQNENFSPDILADWLRGTPLNAVWFGAVREDPAITHILQRQ

Flanking regions ( +/- flanking 50bp)

AAACTCCGCTGATAAATATTGAAAGTGACTGATATTCAAAGGATTCGGTAATGACGATGACAACGGCCCTCAATACACAGATCCCTGTCCGAAGTTGCGCCACTATACCTGAACCGCTGCGCCGGTTATGTGATACACATCCGGGCGGCCATGCAATGGTGATCAGTATTGTCGGGGCAGGCGGCAAAACCAGCTGTCTGTTCTGGCTGGCACAGGCTTTTTCTCAATTAGGGAAAAAGGTGATGATCACCACCACCACCCATATGTTTCTGCCCCGCGAAGGGTTCCCGGTCATTCTCGCCTGTCACCCGGTCCGCCTGCCTGATGCGGTCACAAACAGAGGCTCATTTGCCTGTTATACCGGCTGGAACCCGCTGAATAACAAGGTTCGCGGCTTTTCCTCCGCTGATATTAACGCCCTGGCGGAACAAAATGCCGTTGATGTTATTTTAGCCGAAGCTGACGGAGCTCGCGGTTTTGGCATAAAAGCGCCGGCTGAGCATGAACCTTGCATACCTGATTACAGTGATTGTGTTATTGCTGTGACGGATGGCCGGCTTCTGGGGGCTCCCGTCGGGCCTGACAATGTTCACCGGTGGTCACATTTCTCTGCCGTTACCGGCTTAAACAGCGGTGATACGCTGGATTTGGGGGCGATAAGCCGCCTGATCCGGCATCCGCAGGGGATGTGGAAATCAGCACCACCGGACGCATTACGGATCTGGCTGATAAACCGCTTTTCTCAAAATGAGAATTTTTCGCCGGATATACTGGCAGACTGGCTCCGCGGCACACCGCTGAACGCAGTATGGTTCGGTGCCGTCAGGGAAGATCCCGCAATTACACACATATTGCAGCGACAATAATATCAATGATAAATGCAGGGATATCCATTGAGGTCTGTTTATGAAAATTT