Homologs in group_2779

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08110 FBDBKF_08110 100.0 Morganella morganii S1 torD Cytoplasmic chaperone TorD involved in molybdoenzyme TorA maturation
EHELCC_13940 EHELCC_13940 100.0 Morganella morganii S2 torD Cytoplasmic chaperone TorD involved in molybdoenzyme TorA maturation
NLDBIP_14385 NLDBIP_14385 100.0 Morganella morganii S4 torD Cytoplasmic chaperone TorD involved in molybdoenzyme TorA maturation
HKOGLL_08015 HKOGLL_08015 100.0 Morganella morganii S5 torD Cytoplasmic chaperone TorD involved in molybdoenzyme TorA maturation
F4V73_RS12890 F4V73_RS12890 84.4 Morganella psychrotolerans - molecular chaperone TorD family protein

Distribution of the homologs in the orthogroup group_2779

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2779

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A7N1J4 1.16e-12 67 30 4 186 3 torD Chaperone protein TorD Vibrio campbellii (strain ATCC BAA-1116)
Q6LS21 8.55e-12 65 28 3 198 3 torD Chaperone protein TorD Photobacterium profundum (strain SS9)
Q87QW8 1.3e-11 65 29 4 186 3 torD Chaperone protein TorD Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q8CW16 1.5e-10 62 31 2 126 3 dmsD Tat proofreading chaperone DmsD Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P69855 1.64e-10 62 31 2 126 3 dmsD Tat proofreading chaperone DmsD Shigella flexneri
P69853 1.64e-10 62 31 2 126 1 dmsD Tat proofreading chaperone DmsD Escherichia coli (strain K12)
P69854 1.64e-10 62 31 2 126 3 dmsD Tat proofreading chaperone DmsD Escherichia coli O157:H7
Q8ZPK0 2.5e-10 61 31 3 126 1 dmsD Tat proofreading chaperone DmsD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q7MJ58 8.06e-10 60 30 5 168 3 torD Chaperone protein TorD Vibrio vulnificus (strain YJ016)
Q5PHH8 8.96e-10 59 30 2 126 3 dmsD Tat proofreading chaperone DmsD Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8Z6Y5 1.74e-09 58 31 2 132 3 dmsD Tat proofreading chaperone DmsD Salmonella typhi
Q8DAQ4 1.81e-09 58 29 5 171 3 torD Chaperone protein TorD Vibrio vulnificus (strain CMCP6)
Q9HR71 4.26e-08 55 27 4 148 2 dmsD Putative dimethyl sulfoxide reductase chaperone Halobacterium salinarum (strain ATCC 700922 / JCM 11081 / NRC-1)
B7VMG5 6.84e-08 54 27 4 198 3 torD Chaperone protein TorD Vibrio atlanticus (strain LGP32)
P44102 1.07e-07 53 24 2 168 3 dmsD Probable Tat proofreading chaperone DmsD Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
C3LN43 9.06e-07 51 26 2 144 3 torD Chaperone protein TorD Vibrio cholerae serotype O1 (strain M66-2)
A5F7G9 9.69e-07 51 26 2 144 3 torD Chaperone protein TorD Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395)
Q9KRC2 1.64e-06 50 26 2 142 3 torD Chaperone protein TorD Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q5E4I0 1.67e-06 50 25 4 201 3 torD Chaperone protein TorD Aliivibrio fischeri (strain ATCC 700601 / ES114)
B5FEZ9 3.36e-06 49 26 4 201 3 torD Chaperone protein TorD Aliivibrio fischeri (strain MJ11)
B6EH87 5.49e-05 46 24 4 173 3 torD Chaperone protein TorD Aliivibrio salmonicida (strain LFI1238)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_08465
Feature type CDS
Gene torD
Product Cytoplasmic chaperone TorD involved in molybdoenzyme TorA maturation
Location 2797 - 3483 (strand: -1)
Length 687 (nucleotides) / 228 (amino acids)

Contig

Accession ZDB_365
Length 192330 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2779
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF02613 Nitrate reductase delta subunit

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3381 Posttranslational modification, protein turnover, chaperones (O) O Cytoplasmic chaperone TorD involved in molybdoenzyme TorA maturation

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K23349 putative dimethyl sulfoxide reductase chaperone - -

Protein Sequence

MNSDNRDPDYLYARQFAYDVLRRLLTDEPTAELLVYLRDEGLSLFPADDELPAMQSALDAMQDDLNTRMLKRGASDFEALHWDFTRLFIGPESPPAPPWESVYVSRDKLLFQESTLNVKTFYQQNGFHLPETEYEAADHIGYELDFLWKLSEQASQELDREQAMCERITAPLAVSSDFMQAHLLAFITPFCRELNNHAETAFYRQLSTLLEVFVRSDYKKINELINLQ

Flanking regions ( +/- flanking 50bp)

ATTCACCACGCCCGCTGAATTTTCGCCCGACGATATCCACGGAGGTATGTGTGAACAGTGATAACCGGGATCCGGATTATCTGTATGCGCGTCAGTTTGCTTATGACGTCCTGCGCCGTCTGCTGACGGACGAACCGACAGCGGAACTGCTGGTTTATCTGCGTGATGAGGGGCTGTCACTGTTTCCGGCAGATGATGAGCTCCCCGCCATGCAGAGTGCGCTCGATGCCATGCAGGATGATCTGAATACCCGCATGCTCAAACGCGGCGCCTCCGATTTTGAGGCACTGCACTGGGATTTCACGCGCCTGTTTATCGGGCCGGAATCGCCGCCTGCGCCGCCGTGGGAGTCAGTTTATGTCTCCCGCGACAAACTGCTGTTTCAGGAAAGTACCCTGAATGTGAAAACCTTTTATCAGCAAAACGGTTTTCATCTGCCGGAAACAGAATATGAGGCGGCGGACCATATCGGCTATGAGCTTGATTTCCTCTGGAAACTGAGTGAACAGGCGTCACAGGAGCTTGACCGGGAACAGGCAATGTGTGAGCGCATCACTGCGCCGCTGGCCGTTTCCTCTGACTTTATGCAGGCACATCTGCTGGCGTTTATCACGCCGTTCTGCCGTGAACTGAATAATCACGCGGAGACCGCGTTTTATCGTCAGCTCAGCACACTTCTGGAAGTCTTTGTCCGGAGTGATTATAAAAAAATTAATGAATTAATAAACTTACAATAATAATTTAAAAACCTGATGATGAGGTAAGAGCAATGTCAGACAGACAGAAA