Homologs in group_714

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_03100 FBDBKF_03100 100.0 Morganella morganii S1 - Glutamate synthase subunit alpha
EHELCC_07435 EHELCC_07435 100.0 Morganella morganii S2 - Glutamate synthase subunit alpha
NLDBIP_07760 NLDBIP_07760 100.0 Morganella morganii S4 - Glutamate synthase subunit alpha
HKOGLL_03635 HKOGLL_03635 100.0 Morganella morganii S5 - Glutamate synthase subunit alpha
F4V73_RS11820 F4V73_RS11820 90.0 Morganella psychrotolerans gltB glutamate synthase large subunit
PMI_RS18295 PMI_RS18295 77.6 Proteus mirabilis HI4320 gltB glutamate synthase large subunit

Distribution of the homologs in the orthogroup group_714

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_714

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P09831 0.0 1601 76 1 1002 1 gltB Glutamate synthase [NADPH] large chain Escherichia coli (strain K12)
E1V8I1 0.0 1139 56 5 1009 1 gltB Glutamate synthase [NADPH] large chain Halomonas elongata (strain ATCC 33173 / DSM 2581 / NBRC 15536 / NCIMB 2198 / 1H9)
P55037 0.0 842 43 12 1024 1 gltB Ferredoxin-dependent glutamate synthase 1 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q05755 0.0 832 44 9 1016 1 gltB Glutamate synthase [NADPH] large chain Azospirillum brasilense
O19906 0.0 816 41 17 1058 3 gltB Ferredoxin-dependent glutamate synthase Cyanidium caldarium
P39812 0.0 808 42 9 1014 1 gltA Glutamate synthase [NADPH] large chain Bacillus subtilis (strain 168)
P51375 0.0 804 41 16 1050 3 gltB Ferredoxin-dependent glutamate synthase Porphyra purpurea
P55038 0.0 802 42 17 1059 1 gltS Ferredoxin-dependent glutamate synthase 2 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q1XDB2 0.0 799 41 16 1051 3 gltB Ferredoxin-dependent glutamate synthase Neopyropia yezoensis
P23225 0.0 799 42 14 1043 1 GLSF Ferredoxin-dependent glutamate synthase, chloroplastic Zea mays
Q9ZNZ7 0.0 793 42 13 1045 1 GLU1 Ferredoxin-dependent glutamate synthase 1, chloroplastic/mitochondrial Arabidopsis thaliana
Q9T0P4 0.0 791 42 16 1054 1 GLU2 Ferredoxin-dependent glutamate synthase 2, chloroplastic Arabidopsis thaliana
Q69RJ0 0.0 791 41 14 1047 2 GLU Ferredoxin-dependent glutamate synthase, chloroplastic Oryza sativa subsp. japonica
Q43155 0.0 775 40 14 1050 1 FdGOGAT Ferredoxin-dependent glutamate synthase, chloroplastic Spinacia oleracea
Q06434 0.0 771 40 16 1051 3 gltB Ferredoxin-dependent glutamate synthase Antithamnion sp.
P96218 0.0 770 41 12 1038 1 gltB Glutamate synthase [NADPH] large chain Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Q0DG35 0.0 764 41 16 1058 2 Os05g0555600 Glutamate synthase 2 [NADH], chloroplastic Oryza sativa subsp. japonica
Q03460 0.0 753 41 17 1063 1 None Glutamate synthase [NADH], amyloplastic Medicago sativa
Q9C102 0.0 751 40 19 1037 1 glt1 Glutamate synthase [NADH] Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q12680 0.0 749 40 20 1054 1 GLT1 Glutamate synthase [NADH] Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q0JKD0 0.0 749 41 19 1064 2 Os01g0681900 Glutamate synthase 1 [NADH], chloroplastic Oryza sativa subsp. japonica
Q9LV03 0.0 748 40 15 1066 1 GLT1 Glutamate synthase 1 [NADH], chloroplastic Arabidopsis thaliana
Q08258 3.01e-97 317 39 5 428 1 None Ferredoxin-dependent glutamate synthase (Fragment) Hordeum vulgare
O29309 9.32e-29 125 49 2 143 3 gltB Archaeal glutamate synthase [NADPH] Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
Q3Z7F6 1.62e-28 124 48 2 143 3 gltB Archaeal-type glutamate synthase [NADPH] Dehalococcoides mccartyi (strain ATCC BAA-2266 / KCTC 15142 / 195)
Q58746 1.02e-26 119 52 1 129 3 MJ1351 Archaeal glutamate synthase [NADPH] Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
B9KBQ2 1.23e-26 119 47 2 142 3 gltB Archaeal-type glutamate synthase [NADPH] Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NBRC 107923 / NS-E)
B1L993 1.99e-26 118 47 2 142 3 gltB Archaeal-type glutamate synthase [NADPH] Thermotoga sp. (strain RQ2)
Q9WYM8 1.99e-26 118 47 2 142 3 gltB Archaeal-type glutamate synthase [NADPH] Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
O29310 5.25e-08 60 21 12 386 4 AF_0952 Uncharacterized protein AF_0952 Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)
O34849 9.95e-06 53 31 7 158 3 yerD Glutamate synthase large subunit-like protein YerD Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_07295
Feature type CDS
Gene -
Product Glutamate synthase subunit alpha
Location 187381 - 190386 (strand: -1)
Length 3006 (nucleotides) / 1001 (amino acids)

Contig

Accession ZDB_363
Length 233386 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_714
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF00310 Glutamine amidotransferases class-II
PF01645 Conserved region in glutamate synthase
PF04898 Glutamate synthase central domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0067 Amino acid transport and metabolism (E) E Glutamate synthase domain 1

Protein Sequence

MLYNPSQDKDNCGFGLIAHLEGQPSHKVVRTAISGLARMQHRGAILADGKTGDGCGLLLQKPDRFFQMIAAENEWRLARNYAVGMLFLSQDPVIAQACRDIIEEELADETLFIAGWRKVPVRPEILGEIALAGMPQIEQVFINAPAGWRARDLERRLFMARRRIEKRISDPDFYVCSLSNLVTIYKGLCMAADLPRFYPDLADLRMESAICLFHQRFSTNTVPRWPLAQPFRYLAHNGEINTITGNREWARARAYKFRTPLIPDLITAAPFVNETGSDSSSLDNMLELFLNGGMDLVRAMRLLVPPAWQNHPDMDDDLRAFFDFNSMHMEPWDGPAGIVISDGRYAACNLDRNGLRPARYVITTDKLITCASEIGIWDYQPDEVTEKGRVGPGELLVIDTQEGRILHTRETDNDLKTRHPYKAWLEKNVVRLTQYQDLMNKTPPQRAFGDAQLAVYQKQFGYTLEELEQVLRVLGENGQEAVGSMGDDTPFAVLSARPRLIYDYFRQQFAQVTNPPVDPLREAHVMSLATSIGREMNVFCEAEGQAHRLSMASPVLMHTDFEQLLSRDPDYYRAEHLSLCFDPRETTLEQAIRTLCDNAEAAVRAGAVLVVLSDRQISPDTLPIPAPMAVGAVQQRLVSQSLRCDANIIAETAGARDPHHFAVLLGFGATAIYPYLACESLLKLCSDNVLTHSPAQVLLNYRNGINKGLYKIMSKMGISAVSSYRCAKLFEAVGLSDSVAEFCFRGVPNRIGGADFSDFQQDLHNLSRLAWLPRKPLDAGGLLKYIHNSEYHAYNPDVIATLQKAVHSGHYADYQHYAALVNGRPAAMLRDLLALRTDTHPISIDETESAESLFSRFDTAAMSIGALSPEAHEALAVAMNRLGGSSNSGEGGEDPARFGTEKNSKIKQVASGRFGVTPGYLRSARVIQIKVAQGAKPGEGGQLPGDKVTPYIASLRYSVPGVTLISPPPHHDIYSIEDLAQLIFDLKQVNPEALISVKLVS

Flanking regions ( +/- flanking 50bp)

CTTTGCCGCAGAAATGCGGCCTAATGTGAGACATGCAAAAGGGGCCACTTATGCTTTATAACCCGTCACAGGATAAGGACAACTGCGGTTTCGGCCTGATTGCCCACCTCGAAGGACAACCCAGCCACAAAGTCGTGCGTACTGCCATCAGCGGGCTGGCGCGGATGCAGCACCGCGGTGCGATCCTCGCCGACGGCAAAACCGGGGACGGCTGCGGTTTGTTATTACAAAAACCCGATCGTTTCTTTCAGATGATTGCTGCGGAGAATGAATGGCGGCTGGCGCGTAATTATGCAGTCGGGATGCTGTTTCTCAGTCAGGATCCGGTCATTGCACAAGCCTGCCGCGATATTATCGAAGAAGAGCTGGCGGACGAAACACTGTTTATCGCAGGCTGGCGTAAAGTGCCGGTCAGACCGGAGATCCTCGGCGAAATCGCCCTCGCCGGTATGCCGCAGATTGAGCAGGTCTTTATCAATGCTCCCGCAGGCTGGCGGGCACGGGATCTGGAACGCCGCCTGTTTATGGCGCGCCGCCGGATTGAAAAGCGCATCAGCGACCCGGATTTTTATGTCTGCAGCCTGTCCAATCTGGTGACGATTTATAAAGGGTTGTGCATGGCCGCCGATCTGCCGCGTTTTTATCCGGATCTGGCCGATTTAAGAATGGAATCCGCTATCTGTCTGTTTCACCAGCGCTTTTCAACCAATACTGTTCCGCGCTGGCCGCTGGCACAGCCTTTCCGCTATCTCGCTCATAACGGCGAAATCAACACTATCACCGGTAACCGCGAATGGGCACGTGCCCGTGCTTACAAATTCCGCACGCCGCTGATCCCGGATCTCATCACCGCCGCCCCGTTTGTTAATGAAACCGGTTCGGATTCCAGCTCACTGGATAATATGCTGGAACTGTTTCTTAACGGCGGAATGGATCTGGTGCGTGCCATGCGGCTGCTGGTACCGCCTGCCTGGCAGAATCACCCGGATATGGATGATGATCTGCGCGCCTTTTTTGATTTTAACTCCATGCATATGGAGCCGTGGGACGGCCCGGCGGGGATTGTTATCTCTGACGGACGCTATGCCGCCTGTAACCTCGACCGCAACGGGCTGCGCCCTGCCCGCTATGTCATTACCACAGACAAACTGATTACCTGTGCCTCTGAGATCGGTATCTGGGATTACCAGCCGGATGAAGTCACGGAAAAAGGCCGTGTCGGGCCGGGGGAACTGCTGGTGATTGATACACAGGAAGGCCGCATTCTGCATACCCGCGAGACCGATAACGATCTCAAAACCCGTCATCCGTACAAGGCGTGGCTGGAGAAAAATGTTGTGCGGCTCACGCAGTATCAGGATCTGATGAATAAAACACCGCCGCAGCGCGCCTTCGGTGATGCACAACTGGCGGTGTATCAGAAACAGTTCGGGTACACCCTGGAAGAGCTGGAGCAGGTTCTGCGGGTGCTGGGGGAAAACGGCCAGGAAGCGGTCGGCTCAATGGGGGATGATACCCCGTTTGCGGTACTCTCTGCCCGTCCGCGCCTGATTTATGACTATTTCCGCCAGCAGTTTGCCCAGGTAACCAACCCGCCGGTCGATCCGCTGCGGGAAGCCCATGTTATGTCACTCGCCACCAGCATCGGCCGGGAGATGAATGTCTTCTGCGAAGCGGAAGGCCAGGCACACCGGCTGAGTATGGCCTCGCCGGTACTGATGCACACGGATTTTGAACAATTGCTGAGCCGTGATCCGGATTATTACCGCGCGGAACATCTGTCACTCTGCTTTGATCCGCGGGAAACCACACTGGAACAGGCGATCCGCACCCTGTGTGATAATGCGGAAGCCGCTGTCCGCGCCGGTGCGGTGCTGGTAGTACTGAGTGACCGGCAGATTTCCCCGGACACCCTGCCGATCCCGGCACCGATGGCAGTAGGCGCGGTACAGCAACGGCTGGTCAGCCAGAGCCTGCGCTGTGATGCCAATATCATCGCCGAAACCGCCGGTGCCCGTGACCCGCATCATTTTGCTGTGCTGCTCGGATTCGGTGCCACCGCCATTTACCCTTATCTTGCCTGTGAATCCCTGCTGAAACTGTGCAGCGATAACGTCCTCACGCACTCACCGGCGCAGGTATTGCTCAACTACCGCAACGGTATCAACAAAGGACTGTATAAAATCATGTCCAAAATGGGGATCTCTGCTGTCTCCTCCTACCGCTGTGCCAAACTGTTTGAAGCTGTCGGCCTGAGTGATTCTGTGGCGGAATTCTGTTTCCGGGGCGTGCCGAACCGGATCGGCGGTGCGGATTTCAGTGATTTCCAGCAGGATCTGCATAATCTGTCCCGCCTCGCCTGGCTGCCGCGCAAACCGCTCGATGCAGGCGGTCTGCTGAAATACATTCATAACAGTGAATATCACGCCTATAACCCGGATGTGATCGCAACATTACAAAAAGCGGTTCACAGCGGACATTATGCGGATTATCAGCACTATGCTGCTCTGGTAAACGGCCGTCCGGCGGCCATGCTGCGCGATTTGCTGGCACTGCGCACGGACACGCACCCCATCAGCATTGATGAAACTGAATCGGCGGAATCCCTGTTTTCCCGCTTTGATACCGCCGCCATGTCTATCGGTGCCCTCAGCCCGGAAGCCCATGAGGCACTGGCTGTCGCCATGAACCGGCTCGGCGGCAGCTCCAATTCCGGCGAAGGCGGAGAAGACCCGGCGCGGTTCGGCACAGAAAAAAACTCTAAAATCAAACAGGTGGCCTCCGGCCGCTTTGGTGTGACACCGGGGTATCTGCGCAGTGCGCGGGTTATCCAGATCAAAGTGGCACAGGGCGCGAAACCCGGCGAAGGTGGTCAGCTTCCCGGTGATAAAGTCACGCCGTATATCGCCTCGCTGCGCTATTCTGTGCCCGGCGTCACCCTGATCTCTCCGCCGCCGCACCATGATATTTACTCTATCGAAGACCTGGCACAGCTGATTTTCGATCTCAAACAGGTCAATCCGGAGGCACTGATTTCCGTCAAACTGGTCTCGTAGCCGGGCGTCGGTACCATTGCCACCGGCGTGGCCAAAGCCTATGCCGATTT