Homologs in group_3439

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14500 FBDBKF_14500 100.0 Morganella morganii S1 - TIR domain-containing protein
EHELCC_07780 EHELCC_07780 100.0 Morganella morganii S2 - TIR domain-containing protein
NLDBIP_08105 NLDBIP_08105 100.0 Morganella morganii S4 - TIR domain-containing protein
HKOGLL_04755 HKOGLL_04755 100.0 Morganella morganii S5 - TIR domain-containing protein

Distribution of the homologs in the orthogroup group_3439

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3439

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_06160
Feature type CDS
Gene -
Product TIR domain-containing protein
Location 236873 - 237628 (strand: -1)
Length 756 (nucleotides) / 251 (amino acids)
In genomic island GI46

Contig

Accession ZDB_362
Length 257361 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3439
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MYKAYSLRVNYDIFDGYLSSGETVKKANNSAAQDGLDSFFDGDGSLVATRIMDDWFPKMKADVFISHSHKDEVLAIKLAGWLKDKLGISSFIDSCVWGYSPNLLKKLDKKFCLKESGHYDYDKRNITNGHVNMMLATSLTKMIDQCECIIFLNTPNSISCKGCIESDGTESPWIYAEIEATRLLRKNTPKRRKTMDIVSMEGQIIALDEAMSVKYDLNLGHLLLLDQSQIFKLHNCGKTGTNALDFLYDSF

Flanking regions ( +/- flanking 50bp)

ATTAGGTAGCAGGATAATTAGTTGAATTGAAAGCGTAATGGAGGAAGATGATGTACAAAGCATACAGCTTAAGAGTAAATTATGATATTTTTGATGGGTATTTATCAAGTGGTGAAACCGTAAAAAAAGCAAATAATTCTGCTGCTCAAGATGGACTTGATTCATTTTTTGATGGTGATGGAAGTCTAGTCGCAACTAGAATAATGGATGATTGGTTTCCAAAAATGAAAGCAGATGTCTTTATCTCCCACTCACATAAAGATGAAGTGCTTGCAATAAAACTAGCAGGATGGCTCAAAGATAAACTAGGTATTTCATCATTCATTGATTCTTGTGTTTGGGGCTATTCCCCCAACCTTTTGAAAAAGCTGGATAAAAAATTTTGCCTTAAAGAGAGTGGGCACTATGACTATGACAAAAGAAACATCACAAATGGCCATGTGAATATGATGTTGGCTACTTCACTTACAAAGATGATTGACCAATGTGAGTGTATTATCTTCTTGAATACTCCTAACTCAATTTCATGCAAAGGATGTATTGAGAGTGATGGAACTGAATCACCTTGGATTTATGCGGAAATAGAAGCAACCAGATTGCTTAGAAAAAATACCCCAAAAAGAAGAAAGACGATGGATATAGTTTCTATGGAAGGGCAAATTATCGCTCTGGATGAAGCTATGTCAGTAAAGTATGACTTAAATTTAGGGCATCTTCTTCTTCTGGATCAGAGCCAGATTTTTAAGTTGCATAATTGTGGCAAGACAGGAACGAATGCTTTAGACTTTCTGTATGACAGTTTTTGAGTGATTTTGAGGTTGTATGGATAATAAAATTGCACACCTTGGTTTCATCC