Homologs in group_3440

Help

4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_14490 FBDBKF_14490 100.0 Morganella morganii S1 - TIR domain-containing protein
EHELCC_07790 EHELCC_07790 100.0 Morganella morganii S2 - TIR domain-containing protein
NLDBIP_08115 NLDBIP_08115 100.0 Morganella morganii S4 - TIR domain-containing protein
HKOGLL_04765 HKOGLL_04765 100.0 Morganella morganii S5 - TIR domain-containing protein

Distribution of the homologs in the orthogroup group_3440

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3440

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_06150
Feature type CDS
Gene -
Product TIR domain-containing protein
Location 235080 - 236222 (strand: -1)
Length 1143 (nucleotides) / 380 (amino acids)

Contig

Accession ZDB_362
Length 257361 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3440
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Domains

PF13676 TIR domain

Protein Sequence

MLPIYQLAVIGSPSDAQLRDLEDAVKTAVAMYGLRLGQEISWEITPDMFTPNQLRSSAVVFFCGVGVDHPSLPSLLRSGTPVIPIVSDLRHVSAEVPELLRPLNCLTYANGGAKRVSIALLECAGLLPKQRRVFVSYRRDEARVAALQMFDALSARHFDVFLDTHSIVPAEDFQTMLWHRLCDSDVLLMLDTPDYFNSRWTSAEFGRALAKGISVLRVAWPETEQSRGLGTASIAELAESELDRGTGRIEDSAIDRICLQLEVVRSKSHAVRIINLVSSLRIGIESIGGEVIGIGVGREIKVRLPTGRIIVVYPTVGVPTSSTMHEASMNYPDESVAILYDHVGLHPQWLNHMDWLGSHIQTAKWVKACEVGWQFADWEV

Flanking regions ( +/- flanking 50bp)

TAAAAAACCACACCATTTGACGATAATTGTAATTGCATACAAGGGTATCCATGCTTCCTATCTATCAGCTTGCTGTTATAGGCTCCCCTTCAGACGCACAACTTCGCGATTTAGAGGACGCGGTTAAAACTGCAGTGGCAATGTACGGGTTACGACTCGGTCAGGAGATTAGTTGGGAAATAACTCCTGATATGTTTACACCAAACCAGTTGCGATCGAGTGCGGTTGTATTTTTTTGCGGGGTAGGAGTGGATCACCCAAGTTTACCGAGCTTGCTCCGCAGCGGCACTCCTGTCATTCCAATTGTATCCGATCTGCGGCATGTATCTGCGGAGGTTCCTGAGCTGCTGCGGCCGCTAAACTGTCTGACCTACGCAAATGGTGGTGCTAAGCGTGTCTCCATAGCTCTTCTTGAATGCGCTGGATTGCTTCCGAAACAACGAAGGGTCTTCGTAAGCTACCGTCGGGATGAGGCCAGGGTTGCCGCGCTCCAGATGTTCGATGCTCTATCAGCACGCCATTTCGACGTATTCCTTGATACTCATAGTATTGTGCCAGCAGAGGATTTTCAGACCATGTTGTGGCATAGACTCTGCGATTCTGACGTGCTGTTGATGTTAGATACTCCTGACTATTTTAATAGTCGTTGGACATCAGCTGAATTTGGGCGAGCTCTCGCGAAAGGTATCAGTGTCCTTCGAGTCGCTTGGCCTGAAACGGAGCAGTCTCGTGGGTTGGGTACTGCAAGCATCGCAGAGTTAGCTGAAAGCGAGTTGGACAGAGGAACAGGACGTATCGAGGATTCCGCTATTGACCGAATTTGTCTTCAGCTTGAGGTTGTACGCAGCAAAAGTCATGCTGTAAGAATTATCAACCTAGTCAGCAGTTTGCGCATTGGAATTGAGTCCATAGGTGGTGAAGTCATTGGTATAGGAGTGGGGAGGGAAATCAAAGTTCGTTTACCTACAGGCCGAATAATAGTTGTCTACCCGACGGTCGGGGTCCCGACATCATCAACCATGCATGAAGCTTCAATGAACTATCCAGATGAATCCGTTGCTATACTGTATGACCATGTGGGGCTGCATCCTCAGTGGTTAAATCATATGGATTGGCTCGGCTCGCATATCCAAACAGCGAAGTGGGTGAAAGCATGCGAGGTCGGCTGGCAGTTTGCGGATTGGGAGGTTTAAAAAGTGGATTCTATTTTTCTCTCAGCAAGCGTCCCAGTCAATGGACGAGG