Homologs in group_3349

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11345 FBDBKF_11345 100.0 Morganella morganii S1 - Phage holin
EHELCC_17870 EHELCC_17870 100.0 Morganella morganii S2 - Phage holin
NLDBIP_05200 NLDBIP_05200 100.0 Morganella morganii S4 - Phage holin
HKOGLL_15460 HKOGLL_15460 100.0 Morganella morganii S5 - Phage holin

Distribution of the homologs in the orthogroup group_3349

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3349

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_02080
Feature type CDS
Gene -
Product Phage holin
Location 4325 - 4714 (strand: -1)
Length 390 (nucleotides) / 129 (amino acids)

Contig

Accession ZDB_360
Length 302856 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3349
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF16931 Putative phage holin

Protein Sequence

MQEPLTGTATASLAGVSIVGLFAGLDAGVVIGAFAGAVVFVLSSRDIKLWHRWGYFVVSFIIGIYGADFVAGLLSKFVSDQPVDRSVGAMFASAGLVGVLVAISKPGSLTEFINKVVGATIDKFRGGGR

Flanking regions ( +/- flanking 50bp)

AGAGATACTGTGCGCGGCACCCTATTAACTCAAATGCAGGACTAAACATAATGCAGGAGCCGTTAACAGGCACAGCAACCGCCTCGTTAGCGGGTGTCTCTATTGTTGGTCTATTTGCCGGACTGGATGCTGGCGTAGTGATCGGGGCATTCGCCGGTGCGGTTGTATTCGTACTTTCATCCCGCGATATCAAGTTGTGGCACAGATGGGGCTATTTCGTCGTGTCATTCATCATTGGTATTTACGGCGCTGACTTTGTTGCCGGTCTGCTGAGTAAGTTTGTCAGTGATCAGCCGGTCGACAGGTCAGTGGGGGCTATGTTTGCTTCGGCCGGTCTGGTAGGTGTACTGGTGGCGATTTCAAAGCCGGGTTCACTCACTGAGTTTATTAACAAAGTGGTCGGAGCGACTATTGATAAATTCAGAGGGGGTGGAAGATGATCCTCCCGGACTTATGGGTTTACACCAATTTCTTTGTGTGTGGCCTGGCG