Homologs in group_3545

Help

4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18475 FBDBKF_18475 100.0 Morganella morganii S1 - Terminase
EHELCC_01910 EHELCC_01910 100.0 Morganella morganii S2 - Terminase
NLDBIP_01550 NLDBIP_01550 100.0 Morganella morganii S4 - Terminase
HKOGLL_00525 HKOGLL_00525 100.0 Morganella morganii S5 - Terminase

Distribution of the homologs in the orthogroup group_3545

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3545

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P54307 1.67e-07 51 40 1 77 1 1 Terminase small subunit Bacillus phage SPP1
P68928 1.57e-05 46 35 0 77 1 1 Terminase small subunit Bacillus phage SF6
P68929 1.57e-05 46 35 0 77 3 1 Terminase small subunit Bacillus phage rho15

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_00485
Feature type CDS
Gene -
Product Terminase
Location 78926 - 79486 (strand: 1)
Length 561 (nucleotides) / 186 (amino acids)
In genomic island GI45

Contig

Accession ZDB_359
Length 392768 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3545
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Domains

PF03592 Terminase small subunit

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3728 Mobilome: prophages, transposons (X) X Phage terminase, small subunit

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07474 phage terminase small subunit - -

Protein Sequence

MTIKRPRKPPARKPTPLNAQMERFCQEYLKAPDNQTDAAIAAGYAPGSACKRASVLMADPRIQERIAQLMQQRNKRTKMSADTVLKRLVDMLDADIADILDEKGDIKPISEWSPVWRKSVAAFDIIDIDGDTRLKKVKLLDKLKVLELIGKHVDINAFRERVQVDVNISLADKLAAARKRAAEGIE

Flanking regions ( +/- flanking 50bp)

ATTTGAAGTTTATCTTTTGTGTGGTCATAATAAACAAAGAGGTAATCATTATGACTATCAAAAGACCACGCAAACCACCAGCACGAAAGCCTACACCGCTGAACGCTCAGATGGAGCGTTTCTGTCAGGAGTATCTCAAAGCGCCTGATAACCAGACTGACGCCGCCATTGCTGCTGGGTACGCTCCCGGTAGTGCCTGTAAGCGTGCATCGGTACTGATGGCAGATCCCCGCATTCAGGAACGTATCGCCCAGCTTATGCAGCAACGGAACAAGCGCACCAAGATGAGCGCTGACACCGTTCTCAAGCGGCTGGTGGATATGCTGGACGCAGATATCGCGGACATACTCGACGAGAAGGGCGATATCAAGCCCATCAGTGAATGGTCGCCGGTCTGGCGTAAGTCGGTAGCCGCATTCGATATCATCGACATCGACGGTGACACCCGACTGAAAAAAGTGAAGCTCCTGGATAAACTCAAGGTGCTGGAGCTGATCGGTAAGCACGTCGATATCAACGCCTTCCGTGAGCGCGTTCAGGTAGACGTCAATATCTCGCTGGCGGATAAACTGGCAGCGGCACGTAAGCGGGCAGCAGAGGGCATTGAGTAATGACAGATGCCGCCACTGTGTCACCGGAAGAACAACTGATTGACGATATC