Homologs in group_3140

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00100 FBDBKF_00100 100.0 Morganella morganii S1 - Scaffold protein
EHELCC_01445 EHELCC_01445 100.0 Morganella morganii S2 - Scaffold protein
NLDBIP_02015 NLDBIP_02015 100.0 Morganella morganii S4 - Scaffold protein
HKOGLL_00060 HKOGLL_00060 100.0 Morganella morganii S5 - Scaffold protein

Distribution of the homologs in the orthogroup group_3140

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3140

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_00020
Feature type CDS
Gene -
Product Scaffold protein
Location 3549 - 4235 (strand: 1)
Length 687 (nucleotides) / 228 (amino acids)

Contig

Accession ZDB_359
Length 392768 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3140
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MFKWKLTKEEFDVLTEEHKAMYKEAGDGYQIQIDGMPDIPDVSGLQKKVDELLSEKKSEQEKRRQAEEAAKKAAEEQARKNGDIESLEKSWAEKLSTREKELLTQLQEKDASLQKLLVDNVAQSLATKLAGDSAALIVPHIKSRLAVEDGKTRVVDATGQLSALTIDELEKEFRNNQLFAPVIIGSKATGTRGDGGKDKSPAGGSDKPKSVNPLVDRAREIIAKNTEA

Flanking regions ( +/- flanking 50bp)

TTTTTATTACCTGTAGTCAGTGACTACACCATCAAAACCAGAGGTTGACGATGTTTAAGTGGAAATTAACCAAAGAAGAATTTGACGTGCTGACTGAAGAGCATAAGGCCATGTACAAAGAAGCCGGTGACGGATACCAAATCCAGATTGACGGCATGCCTGACATCCCGGATGTGTCCGGTCTTCAGAAGAAAGTCGATGAACTGTTATCTGAGAAGAAATCAGAACAGGAAAAGCGCCGTCAGGCTGAAGAAGCCGCAAAGAAAGCTGCAGAAGAACAGGCCCGTAAAAACGGTGATATCGAATCACTGGAAAAGAGCTGGGCTGAAAAACTCAGCACCCGCGAAAAAGAGTTACTGACACAGTTACAGGAAAAAGATGCCAGCCTGCAAAAACTTTTGGTTGATAACGTCGCGCAGTCGCTGGCGACAAAACTTGCGGGTGACAGTGCCGCGCTGATTGTGCCGCATATCAAATCACGCCTTGCCGTTGAAGATGGTAAAACCCGCGTGGTGGACGCAACTGGGCAACTATCAGCTCTGACTATCGATGAGCTAGAAAAAGAATTCAGAAATAATCAGTTATTTGCGCCGGTCATTATCGGCAGTAAGGCAACCGGAACCAGGGGTGACGGAGGCAAAGACAAATCACCTGCCGGAGGCAGTGATAAACCCAAAAGTGTGAATCCATTGGTGGATCGCGCACGTGAAATCATTGCAAAAAATACAGAGGCATAAGATTTATGACATTGCATATTTTTCAGCATCAGGTATCTCTGGCAGCGACA