Homologs in group_3321

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11035 FBDBKF_11035 100.0 Morganella morganii S1 potE Serine transporter YbeC, amino acid:H+ symporter family
EHELCC_05190 EHELCC_05190 100.0 Morganella morganii S2 potE Serine transporter YbeC, amino acid:H+ symporter family
NLDBIP_05510 NLDBIP_05510 100.0 Morganella morganii S4 potE Serine transporter YbeC, amino acid:H+ symporter family
LHKJJB_02390 LHKJJB_02390 100.0 Morganella morganii S3 potE Serine transporter YbeC, amino acid:H+ symporter family

Distribution of the homologs in the orthogroup group_3321

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3321

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P42590 0.0 786 83 0 475 1 ygjI Inner membrane transporter YgjI Escherichia coli (strain K12)
P75835 6.79e-28 119 24 6 383 1 ycaM Inner membrane transporter YcaM Escherichia coli (strain K12)
A2RL65 3.47e-19 93 21 6 395 3 acaP Aspartate/glutamate permease AcaP Lactococcus lactis subsp. cremoris (strain MG1363)
P39282 6.51e-19 92 23 10 422 1 yjeM Inner membrane transporter YjeM Escherichia coli (strain K12)
P0A2N4 7.26e-19 92 24 11 428 3 yjeM Inner membrane transporter YjeM Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2N5 7.26e-19 92 24 11 428 3 yjeM Inner membrane transporter YjeM Salmonella typhi
P37034 2.82e-14 78 22 11 477 3 lpg1691 Uncharacterized transporter lpg1691 Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Q9CG19 1.94e-13 75 20 6 448 3 gadC Glutamate/gamma-aminobutyrate antiporter Lactococcus lactis subsp. lactis (strain IL1403)
O30417 5.92e-13 74 20 6 448 2 gadC Glutamate/gamma-aminobutyrate antiporter Lactococcus lactis subsp. cremoris (strain MG1363)
P63236 1.45e-11 70 23 11 390 3 gadC Glutamate/gamma-aminobutyrate antiporter Shigella flexneri
P63235 1.45e-11 70 23 11 390 1 gadC Glutamate/gamma-aminobutyrate antiporter Escherichia coli (strain K12)
Q8FHG6 1.8e-11 69 23 11 385 3 gadC Glutamate/gamma-aminobutyrate antiporter Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P58229 1.93e-11 69 23 11 390 3 gadC Glutamate/gamma-aminobutyrate antiporter Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_15770
Feature type CDS
Gene potE
Product Serine transporter YbeC, amino acid:H+ symporter family
Location 72054 - 73520 (strand: 1)
Length 1467 (nucleotides) / 488 (amino acids)
In genomic island -

Contig

Accession ZDB_695
Length 101591 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3321
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF13520 Amino acid permease

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0531 Amino acid transport and metabolism (E) E Serine transporter YbeC, amino acid:H+ symporter family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K20265 glutamate:GABA antiporter Quorum sensing -

Protein Sequence

MSTSARNTIGKFGLLSMTFAAVYSFNNVINNNIELGLASAPMFFIATIFYFIPFCLIIAEFVSLNKNSEAGVYAWVRSALGGRWAFLAAYTYWFVNLFFFTSLLPRVIAYASYAFLGYEYIFTPVTTALLSTVLFAFSTYVSTNGAKLLGPMTSVTSSMMLLLTFSYIALAGVALVGGIQPADPITVEAMTPNFNWAFLGITAWIFMAAGGAESVAVYVNDVKGGSKAFVKVIIIAGLFIGLLYSVSSVVINVFVPREALKFTGGSVQVFEGLSTYFGLPEILMNRFVGVVSFTAMFGSLLMWTAAPVKIFFAEIPKGVFGAKTVELNKHGVPARAAWIQFLIVIPLMFIPTLGSDTVQDLMNTVINMTAAASMLPPLFIMLAYLNLRRKLDHIPRDFRMGSRTTGIAVVSLLIVIFTIGFLASTFPTGANIATILFYNVSGILIFLGYAWWKYSRYEKTLTAEERKIADAPTAQTALARGEESVDNI

Flanking regions ( +/- flanking 50bp)

GACCATTGAAGACGGTTATTTCCTGAATAAATAGATCCACGGAGAACGCTATGTCCACATCCGCGCGTAATACCATCGGCAAGTTCGGACTGCTGTCCATGACCTTTGCCGCTGTATACAGTTTTAACAACGTCATTAATAATAATATCGAGCTCGGACTGGCTTCCGCACCGATGTTCTTTATCGCCACGATTTTCTATTTTATTCCGTTCTGTCTGATTATCGCGGAGTTCGTCTCCCTGAATAAAAACTCCGAAGCCGGTGTTTACGCCTGGGTGCGCAGTGCCCTCGGCGGCCGCTGGGCTTTCCTCGCTGCTTATACCTACTGGTTTGTGAACCTGTTTTTCTTCACCTCGCTGCTGCCGCGTGTTATCGCCTATGCTTCTTACGCTTTCCTCGGCTATGAATATATCTTCACGCCGGTCACCACTGCGCTGCTCAGTACCGTGCTGTTTGCCTTCTCCACCTATGTTTCCACCAACGGGGCAAAACTGCTGGGACCGATGACCTCTGTCACTTCCTCGATGATGCTGCTGCTGACCTTCTCGTATATCGCGCTGGCCGGCGTTGCGCTGGTGGGGGGAATTCAGCCTGCGGATCCGATCACTGTGGAAGCCATGACGCCGAACTTTAACTGGGCATTCCTCGGGATCACCGCGTGGATCTTTATGGCGGCCGGAGGTGCGGAATCAGTTGCCGTGTATGTGAATGACGTCAAAGGCGGCAGTAAAGCATTCGTGAAGGTGATTATTATTGCCGGATTATTCATCGGCCTGCTCTATTCCGTCTCCTCCGTGGTGATCAACGTGTTTGTACCGCGTGAAGCACTGAAGTTTACCGGCGGCTCGGTACAGGTCTTTGAAGGGTTATCCACCTATTTCGGTCTGCCGGAGATCCTGATGAACCGCTTTGTCGGCGTGGTCTCTTTCACCGCCATGTTCGGCTCTCTGCTGATGTGGACCGCAGCACCGGTTAAAATCTTCTTCGCGGAGATCCCGAAAGGTGTCTTTGGTGCCAAAACCGTCGAACTGAACAAACACGGCGTACCGGCACGTGCCGCCTGGATCCAGTTCCTGATTGTGATCCCGCTGATGTTTATCCCGACCCTCGGTTCCGATACTGTTCAGGATCTGATGAACACCGTCATCAACATGACTGCCGCTGCATCAATGCTGCCGCCGCTGTTTATCATGCTGGCCTATCTTAATCTGCGCCGCAAACTGGATCATATCCCGCGTGACTTCCGCATGGGTTCACGCACCACGGGGATTGCGGTGGTCTCCCTGCTGATTGTAATTTTCACTATCGGCTTCCTGGCCTCCACCTTCCCGACCGGTGCCAACATTGCGACCATTCTGTTCTATAACGTCAGCGGGATCCTGATTTTCCTGGGCTACGCCTGGTGGAAATACAGCCGTTATGAGAAAACCCTGACCGCAGAAGAGCGGAAAATCGCCGATGCCCCGACCGCGCAAACCGCGCTGGCACGCGGCGAAGAATCCGTCGATAATATCTGATTATCCTGCAGATACTGAAAAGCCACCGGACGGTGGCTTTTTTATGTCTG