Homologs in group_3561

Help

4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18620 FBDBKF_18620 100.0 Morganella morganii S1 - phage major capsid protein
EHELCC_15195 EHELCC_15195 100.0 Morganella morganii S2 - phage major capsid protein
NLDBIP_15725 NLDBIP_15725 100.0 Morganella morganii S4 - phage major capsid protein
LHKJJB_16115 LHKJJB_16115 100.0 Morganella morganii S3 - phage major capsid protein

Distribution of the homologs in the orthogroup group_3561

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3561

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_15235
Feature type CDS
Gene -
Product phage major capsid protein
Location 103177 - 104397 (strand: 1)
Length 1221 (nucleotides) / 406 (amino acids)
In genomic island -

Contig

Accession ZDB_694
Length 115897 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3561
Orthogroup size 5
N. genomes 5

Actions

Genomic region

Domains

PF05065 Phage capsid family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4653 Mobilome: prophages, transposons (X) X Predicted phage phi-C31 gp36 major capsid-like protein

Protein Sequence

MKLHELKQKRNTIATEMRAIHEKVGDGVMTEEQRGEWNQAKTEFDRLNEQITREEELRSADQTFVDDKEPEQRGKQPGNPESEAAERRQAAFDRFLRHGFGELTAEERQAVKELRAQGTSPDEKGGYTVPTQMLNKVVDQMKAYGGIAGISQILTTSNGQDITWSTSDGTAEEGELLGENTAASEQDVEFGTAILGAKKLSSKIIRVSNELLQDSGIDIESYLAARIAQRIGRGEAKYLVKGTGAGTPVQPKGLDASVTGTVDASAVFTWKDINALKHAIDPAYRNNPKFRLAFNDSTLKLMTEMEDGNKRPLWLPEITGVAPSTILGMQYAVDQAIDSMETGKKFIFCGDFDRFIVRRVTYMTLKRLVERYAEYDQTAFLAFHRFDCCLEDTSAIKALVAKAATK

Flanking regions ( +/- flanking 50bp)

AACTGGCGCGTGAGCGTCTTCTTACATTAATGAATGCATAAGGTAACTCTATGAAACTTCATGAATTAAAACAAAAACGTAATACTATCGCCACCGAAATGCGCGCTATCCATGAAAAAGTCGGTGACGGTGTCATGACCGAAGAGCAGCGCGGCGAGTGGAATCAGGCCAAAACTGAGTTTGACCGCCTGAATGAGCAGATCACCCGCGAAGAGGAACTGCGCTCGGCAGATCAGACCTTCGTGGATGACAAAGAGCCGGAGCAGCGCGGAAAGCAGCCGGGTAATCCGGAAAGCGAAGCCGCAGAGCGCCGTCAGGCGGCATTTGACCGTTTTCTCCGTCATGGTTTCGGTGAACTGACAGCTGAAGAACGCCAGGCGGTTAAAGAGCTGCGTGCGCAGGGGACCTCCCCGGATGAAAAAGGGGGCTACACTGTACCCACTCAGATGCTGAATAAAGTCGTTGATCAGATGAAAGCCTATGGCGGCATTGCAGGCATTTCGCAGATTCTGACAACTTCAAACGGGCAGGATATTACCTGGTCAACATCAGACGGCACAGCGGAAGAGGGTGAACTGCTGGGTGAAAACACCGCAGCCAGCGAACAGGATGTGGAATTCGGGACCGCCATTCTCGGTGCCAAAAAATTGTCTTCCAAAATTATCCGTGTATCCAATGAGTTGCTGCAGGACAGCGGGATTGATATTGAATCCTACCTCGCAGCACGGATTGCGCAGCGTATCGGACGCGGTGAGGCGAAATATCTGGTGAAAGGTACCGGCGCAGGCACTCCGGTGCAGCCGAAGGGGCTGGATGCATCCGTTACCGGCACGGTCGATGCCTCTGCCGTATTCACCTGGAAAGATATTAATGCCCTGAAACACGCCATTGACCCGGCTTACCGTAACAACCCGAAATTCCGACTGGCTTTTAATGACAGCACCCTGAAACTGATGACAGAAATGGAAGACGGTAACAAGCGTCCGCTGTGGCTGCCTGAAATCACCGGCGTGGCACCTTCGACCATTCTGGGTATGCAGTATGCTGTGGATCAGGCTATCGACAGCATGGAAACCGGCAAGAAGTTTATCTTCTGTGGTGACTTCGATCGCTTCATTGTCCGCCGTGTCACCTATATGACACTGAAGCGTCTGGTGGAGCGTTATGCAGAATATGACCAGACTGCATTCCTCGCGTTTCACCGCTTTGACTGCTGCCTGGAAGACACCTCCGCGATTAAGGCGCTGGTGGCCAAAGCTGCGACAAAGTAATCCGGTCTTAACCCGATACGCCGCTTAACTGCGGTTTTTTTGTGCCTGCG