Homologs in group_1750

Help

6 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12200 FBDBKF_12200 100.0 Morganella morganii S1 - Carboxymuconolactone decarboxylase family protein
EHELCC_14105 EHELCC_14105 100.0 Morganella morganii S2 - Carboxymuconolactone decarboxylase family protein
NLDBIP_15200 NLDBIP_15200 100.0 Morganella morganii S4 - Carboxymuconolactone decarboxylase family protein
LHKJJB_15410 LHKJJB_15410 100.0 Morganella morganii S3 - Carboxymuconolactone decarboxylase family protein
PMI_RS01330 PMI_RS01330 73.9 Proteus mirabilis HI4320 - carboxymuconolactone decarboxylase family protein
PMI_RS04490 PMI_RS04490 36.0 Proteus mirabilis HI4320 - carboxymuconolactone decarboxylase family protein

Distribution of the homologs in the orthogroup group_1750

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1750

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P27749 1.23e-20 82 41 0 103 4 H16_B0147 Uncharacterized protein H16_B0147 Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337)
P08304 1.97e-11 59 37 0 83 4 None Uncharacterized protein 4 in cox locus Paracoccus denitrificans
Q57498 7.55e-08 50 33 0 104 4 HI_1053 Uncharacterized protein HI_1053 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
B1MJX0 0.000179 42 40 0 52 3 ahpD Alkyl hydroperoxide reductase AhpD Mycobacteroides abscessus (strain ATCC 19977 / DSM 44196 / CCUG 20993 / CIP 104536 / JCM 13569 / NCTC 13031 / TMC 1543 / L948)
C3PGV9 0.000525 40 36 0 47 3 ahpD Alkyl hydroperoxide reductase AhpD Corynebacterium aurimucosum (strain ATCC 700975 / DSM 44827 / CIP 107346 / CN-1)
C4LJ26 0.000776 40 35 1 68 3 ahpD Alkyl hydroperoxide reductase AhpD Corynebacterium kroppenstedtii (strain DSM 44385 / JCM 11950 / CIP 105744 / CCUG 35717)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_14530
Feature type CDS
Gene -
Product Carboxymuconolactone decarboxylase family protein
Location 83378 - 83713 (strand: -1)
Length 336 (nucleotides) / 111 (amino acids)

Contig

Accession ZDB_693
Length 123756 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1750
Orthogroup size 7
N. genomes 6

Actions

Genomic region

Domains

PF02627 Carboxymuconolactone decarboxylase family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0599 General function prediction only (R) R Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01607 4-carboxymuconolactone decarboxylase [EC:4.1.1.44] Benzoate degradation
Metabolic pathways
Microbial metabolism in diverse environments
Degradation of aromatic compounds		 -

Protein Sequence

MSYYKDVIKDIAGNMQELHKNIPDVMGAFMTIMQSSTADGVLDKKTKELIAVAIAVANRCDGCIGFHTKTLVELGVTEQELSEALGIAIGMGGGPSVMYAANTLKAFKEFS

Flanking regions ( +/- flanking 50bp)

TTAATATTATATAATAAAGTATATTATTAATACCTATAACAGAGGTGACTATGTCCTACTACAAAGATGTGATCAAAGATATCGCCGGCAACATGCAGGAATTGCACAAAAATATTCCGGACGTGATGGGAGCGTTTATGACCATCATGCAAAGCAGCACGGCTGACGGTGTACTGGATAAAAAGACCAAAGAATTGATTGCTGTGGCGATTGCCGTTGCCAACCGCTGTGACGGCTGTATTGGTTTTCATACCAAAACGCTGGTGGAGCTGGGGGTAACAGAGCAGGAATTATCAGAAGCCCTGGGTATTGCTATCGGCATGGGTGGCGGGCCGTCTGTGATGTATGCGGCGAATACATTGAAGGCATTTAAAGAGTTCTCATAAAAGCATCGTTCTTTTGATACGGGTTACAGGCGAAAGTGTGTAACCCGTAT